| Contig | mRNA | Basal internode | Ear internode | ||||
---|---|---|---|---|---|---|---|---|
Maize phenylpropanoid and lignin pathway related genes | Â | Â | F2 | F2bm3/F2 | AS225/F2 | F2 | F2bm3/F2 | AS225/F2 |
Phenylalanine/Tyrosine ammonia-lyase (PAL/TAL, MZPAL) | 2161072.2.1 | L77912 | 38154 | 0.50 | 0.92 | 187353 | 0.22 | 0.66 |
Cinnamate 4-hydroxylase 2 (C4H2) | - | CF647652 | 30820 | 1.71 | 1.28 | 19988 | 3.20 | 1.80 |
4-Coumarate:CoA ligase 2 (4CL2) | - | - | 22694 | 1.59 | 1.39 | 21414 | 2.36 | 1.22 |
Caffeic acid O-methyltransferase (COMT) | 2192909.2.3 | M73235 | 39113 | 0.25 | 0.22 | 142203 | 0.05 | 0.12 |
Ferulate 5-hydroxylase (F5H) | - | DR966008 | 13754 | 3.13 | 2.34 | 45662 | 0.99 | 0.54 |
Caffeoyl CoA O-methyltransferase (CCoAOMT3) | 2591258.2.1 | AY104670 | 32846 | 1.87 | 1.97 | 23740 | 3.18 | 2.45 |
Caffeoyl-CoA O-methyltransferase (CCoAOMT4) | 2943966.2.1 | AI855419 | 14245 | 1.98 | 1.84 | 13947 | 2.38 | 1.54 |
Peroxidase (ZmPox2) | 2619325.2.1 | AJ401275 | 20634 | 2.60 | 1.58 | 10903 | 4.02 | 2.66 |
Peroxidase (4th zinnia DV017512 ortholog) | 2763121.2.1 | AY110228 | 15081 | 1.75 | 1.27 | 10476 | 2.63 | 1.73 |
Laccase (Poplar lac3 1st ortholog) | 8616263.2.1 | BG842157 | 83977 | 2.05 | 1.79 | 46998 | 3.80 | 2.79 |
Laccase (Poplar lac3 3rd ortholog) | 2440419.2.1 | BT019237 | 21387 | 2.08 | 1.49 | 13702 | 2.90 | 1.85 |
Aldehyde dehydrogenase (ALDH, ALDH22A1 ortholog) | 2750698.2.1 | AY109842 | 21185 | 2.05 | 1.38 | 13749 | 2.75 | 1.75 |
Chorismate mutase | 2521459.2.4 | AY103806 | 34104 | 1.78 | 1.91 | 19436 | 3.85 | 2.45 |
Chorismate mutase/Prephenate dehydratase | 2950290.2.1 | AY109614 | 19357 | 2.09 | 1.54 | 18751 | 2.35 | 1.42 |
Chalcone flavonone isomerase (ZmCHI1) | 3390529.2.1 | Z22760 | 30010 | 2.79 | 1.85 | 19524 | 3.73 | 2.31 |