Table 9 Gene ontology (GO) functional classification for ESTs generated from NEC, EC and EMB cDNA libraries
GO term | GO ID | All tissues | NEC | EC | Emb | ||||
|---|---|---|---|---|---|---|---|---|---|
| Â | Â | No. | % | No. | % | No. | % | No. | % |
Biological Process | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Reproduction | GO:0000003 | 29 | 0.3 | 8 | 0.2 | 2 | 0.2 | 19 | 0.4 |
Reproductive process | GO:0022414 | 17 | 0.2 | 7 | 0.2 | 2 | 0.2 | 8 | 0.2 |
Immune system process | GO:0002376 | 22 | 0.2 | 1 | 0.0 | 2 | 0.2 | 19 | 0.4 |
Metabolic process | GO:0008152 | 5247 | 57.1 | 1968 | 58.3 | 491 | 55.3 | 2788 | 56.6 |
Cellular process | GO:0009987 | 5492 | 59.8 | 2058 | 61.0 | 521 | 58.7 | 2913 | 59.1 |
Viral reproduction | GO:0016032 | 4 | 0.0 | 2 | 0.1 | - | - | 2 | 0.0 |
Reproductive process | GO:0022414 | 17 | 0.2 | 7 | 0.2 | 2 | 0.2 | 8 | 0.2 |
Biological adhesion | GO:0022610 | 28 | 0.3 | 7 | 0.2 | - | - | 21 | 0.4 |
Multicellular organismal process | GO:0032501 | 52 | 0.6 | 8 | 0.2 | 6 | 0.7 | 38 | 0.8 |
Developmental process | GO:0032502 | 268 | 2.9 | 76 | 2.3 | 25 | 2.8 | 167 | 3.4 |
Growth | GO:0040007 | 2 | 0.0 | 1 | 0.0 | - | - | 1 | 0.0 |
Response to stimulus | GO:0050896 | 470 | 5.1 | 123 | 3.6 | 40 | 4.5 | 307 | 6.2 |
Localization | GO:0051179 | 1929 | 21.0 | 664 | 19.7 | 173 | 19.5 | 1092 | 22.2 |
Establishment of localization | GO:0051234 | 1925 | 20.9 | 661 | 19.6 | 173 | 19.5 | 1091 | 22.1 |
Maintenance of localization | GO:0051235 | 18 | 0.2 | 9 | 0.3 | 2 | 0.2 | 7 | 0.1 |
Multi-organism process | GO:0051704 | 32 | 0.3 | 13 | 0.4 | 2 | 0.2 | 17 | 0.3 |
Biological regulation | GO:0065007 | 422 | 4.6 | 128 | 3.8 | 38 | 4.3 | 256 | 5.2 |
Molecular Function | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Motor activity | GO:0003774 | 20 | 0.2 | 7 | 0.2 | 1 | 0.1 | 12 | 0.2 |
Catalytic activity | GO:0003824 | 3811 | 41.5 | 1430 | 42.4 | 309 | 34.8 | 2072 | 42.0 |
Structural molecule activity | GO:0005198 | 1266 | 13.8 | 563 | 16.7 | 141 | 15.9 | 562 | 11.4 |
Transporter activity | GO:0005215 | 595 | 6.5 | 215 | 6.4 | 64 | 7.2 | 316 | 6.4 |
Binding | GO:0005488 | 4494 | 48.9 | 1749 | 51.8 | 389 | 43.8 | 2356 | 47.8 |
Auxiliary transport protein activity | GO:0015457 | 1 | 0.0 | - | - | - | - | 1 | 0.0 |
Antioxidant activity | GO:0016209 | 219 | 2.4 | 49 | 1.5 | 18 | 2.0 | 152 | 3.1 |
Enzyme regulator activity | GO:0030234 | 102 | 1.1 | 52 | 1.5 | 5 | 0.6 | 45 | 0.9 |
Transcription regulator activity | GO:0030528 | 191 | 2.1 | 62 | 1.8 | 15 | 1.7 | 114 | 2.3 |
Translation regulator activity | GO:0045182 | 188 | 2.0 | 50 | 1.5 | 15 | 1.7 | 123 | 2.5 |
Nutrient reservoir activity | GO:0045735 | 15 | 0.2 | 1 | 0.0 | - | - | 14 | 0.3 |
Molecular transducer activity | GO:0060089 | 135 | 1.5 | 58 | 1.7 | 9 | 1.0 | 68 | 1.4 |
Cellular Component | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Extracellular region | GO:0005576 | 73 | 0.8 | 14 | 0.4 | 8 | 0.9 | 51 | 1.0 |
Cell | GO:0005623 | 6845 | 74.5 | 2491 | 73.8 | 680 | 76.6 | 3674 | 74.5 |
Virion | GO:0019012 | 8 | 0.1 | 3 | 0.1 | - | - | 5 | 0.1 |
Extracellular matrix | GO:0031012 | 1 | 0.0 | - | - | - | - | 1 | 0.0 |
Membrane-enclosed lumen | GO:0031974 | 104 | 1.1 | 41 | 1.2 | 10 | 1.1 | 53 | 1.1 |
Envelope | GO:0031975 | 111 | 1.2 | 31 | 0.9 | 13 | 1.5 | 67 | 1.4 |
Macromolecular complex | GO:0032991 | 1871 | 20.4 | 761 | 22.6 | 207 | 23.3 | 903 | 18.3 |
Organelle | GO:0043226 | 5927 | 64.5 | 2185 | 64.8 | 602 | 67.8 | 3140 | 63.7 |
Organelle part | GO:0044422 | 1148 | 12.5 | 541 | 16.0 | 112 | 12.6 | 495 | 10.0 |
Extracellular matrix part | GO:0044420 | 1 | 0.0 | - | - | - | - | 1 | 0.0 |
Extracellular region part | GO:0044421 | 5 | 0.1 | - | - | 2 | 0.2 | 3 | 0.1 |
Virion part | GO:0044423 | 8 | 0.1 | 3 | 0.1 | - | - | 5 | 0.1 |
Cell part | GO:0044464 | 6845 | 74.5 | 2491 | 73.8 | 680 | 76.6 | 3674 | 74.5 |