Skip to main content

Table 3 Differences between monocot and dicot ABPs and NLPs. Differences between monocot and dicot ABPs and NLPs (shown in boldface).

From: Cupin: A candidate molecular structure for the Nep1-like protein family

  2d-Structure and glycosylation sites ([nx(st)])
Protein   C62c89-coli β-barrel
Type I NLP consensus ααβαββ Cβ nts L Ck β A β B β C ηβ D β E H β F β G v β H T β I αβ α
PpAAK19753 αββαββ nts l ck β A β B β C ηβ D β E h β6β F β G v β H t β I αβ α
MpNEPl αααβ nws l ck β A β B β C ηβ D β E h β F β G v β H t β I α α
Type II NLP consensus αβαβ Cβ tln l Cr β A C B β C ηβDβE H β6β F β G g β H A β I α α
Dicot ABP  A" nis α l β A ,r β A α β B β C ηβDβE h β F nst β G v β H t βIβJ αβ
Monocot ABP  A" dis α m β A ,i β A α β B β C ηβ D β E s β F nst β G p β H s βIβJ αβ
  1. The dicot glycosylation site nis sequence is not present in the monocot sequences (dis). nts, nst and nws are possible NLP glycosylation sites.