Skip to main content

Table 1 Selected transcripts involved in ROS metabolism, carbohydrate and proline metabolism, hormone synthesis and hormone response, cell wall loosening proteins, and transport.

From: Spatial distribution of transcript changes in the maize primary root elongation zone at low water potential

ID

C1

C2

C2/3

Annotation

Accession ID

Evalue

 

Fold Change

Reactive Oxygen Metabolism

  

MZ00042638

3.8

8.8

5.0

catalase isozyme 3 (EC 1.11.1.6)

gb|AAA33441.1

0

MZ00041427

2.7

4.0

 

Catalase isozyme 3

sp|P18123

4E-100

MZ00039683

2.3

  

metallothionein-like protein [Saccharum hybrid cultivar]

gb|AAV50043.1

2E-21

MZ00037083

2.8

12.9

 

metallothionein- like protein [Zea mays]

emb|CAA57676.1

4E-33

MZ00026815

8.9

3.0

 

putative oxalate oxidase [Oryza sativa (japonica cultivar-group)]

ref|XP_469352.1

0

MZ00037273

2.0

  

peroxidase prx15 precursor [Spinacia oleracea]

gb|AAF63027.1

3E-55

MZ00015469

 

27.2

4.7

putative peroxidase [Oryza sativa (japonica cultivar-group)]

ref|NP_919535.1

0

    

Carbon Metabolism

  

MZ00026383

2.9

10.8

3.9

sucrose synthase 3 {Zea mays;}

gb|AAM89473.1

0

MZ00018306

 

0.3

 

putative alkaline/neutral invertase {Oryza sativa (japonica cultivar-group);}

gb|BAD33266.1

2E-158

MZ00005490

 

0.2

0.2

Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) {Zea mays;}

sp|P49175

1E-46

MZ00014257

2.2

  

Glucose-1-phosphate adenylyltransferase large subunit 2 (EC 2.7.7.27)

sp|P55234

1E-264

MZ00021179

1.8

  

Putative starch synthase {Oryza sativa (japonica cultivar-group);}

gb|AAK98690.1

8E-17

MZ00041252

2.2

  

myo-inositol 1-phosphate synthase {Zea mays;}

gb|AAG40328.1

8E-271

MZ00015192

 

0.1

0.1

putative myo-inositol oxygenase {Oryza sativa (japonica cultivar-group);}

gb|BAD53821.1

5E-152

MZ00025596

3.5

5.2

4.0

putative delta l pyrroline-5-carboxylate synthetase {Oryza sativa}

gb|BAB64280.1

8E-209

MZ00027872

0.2

0.1

0.1

putative proline oxidase {Oryza sativa (japonica cultivar-group);}

gb|AAP54933.1

3E-150

    

Hormones

  

MZ00051675

0.5

  

CIPK-like protein {Oryza sativa (japonica cultivar-group);}

gb|AAP82174.1

1E-40

MZ00019036

 

3.0

2.2

putative protein phosphatase 2C {Oryza sativa (japonica cultivar-group);}

gb|AAT58680.1

3E-155

MZ00028000

 

3.6

 

putative protein phosphatase 2C {Oryza sativa (japonica cultivar-group);}

gb|AAT58680.1

2E-87

MZ00016125

 

3.0

3.1

protein phosphatase 2C-like protein {Oryza sativa (japonica cultivar-group);}

gb|BAC05575.1

2E-162

MZ00007968

 

2.5

2.5

TRAB1 [Oryza sativa (japonica cultivar-group)]

ref|XP_482899.1

3E-17

MZ00051037

1.6

  

ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)

ref|NP_567949.1

3E-14

MZ00026642

4.2

 

6.1

dehydrin [Zea mays]

gb|AAA33480.1

0

MZ00041440

 

5.2

 

dehydrin [Zea mays]

gb|AAA33480.1

0

MZ00042357a

4.5

4.5

 

Group 3 Lea protein MGL3 [Zea mays]

emb|CAA82632.1

3E-76

MZ00015996

1.2

  

putative Ubiquitin ligase SINAT5 [Oryza sativa (japonica cultivar-group)]

ref|XP_465055.1

0

MZ00035785

1.8

  

jacalin homolog [Oryza sativa (japonica cultivar-group)]

gb|ABA97248.1

2E-15

MZ00024083

12.4

  

JI23_HORVU 23 kDa jasmonate-induced protein

sp|P32024

2E-21

MZ00050071

0.5

  

ethylene-binding protein-like [Oryza sativa (japonica cultivar-group)]

dbj|BAD38371.1

2E-64

    

Wall Loosening

  

MZ00021464

 

2.2

 

putative endoxyloglucan transferase [Oryza sativa]

ref|NP_922874.1

2E-77

MZ00016971

3.7

  

alpha-expansin 1 [Zea mays]

gb|AAK56119.1

0

MZ00030567

2.4

  

alpha-expansin [Oryza sativa (japonica cultivar-group)]

ref|XP_475418.1

0

MZ00029301

 

8.0

6.3

beta-expansin [Oryza sativa]

gb|AAF72988.1

0

MZ00036823

1.9

 

1.9

putative endo-1,3;1,4-beta-D-glucanase [Oryza sativa (japonica cultivar-group)]

gb|AAU10802.1

8E-17

    

Transport

  

MZ00025001

4.6

12.1

5.7

Putative anion transporter [Oryza sativa]

ref|XP_470223.1

0

MZ00006817

3.0

  

putative ripening regulated protein [Oryza sativa (japonica cultivar-group)]

dbj|BAD46507.1

7E-36

MZ00011868

2.2

  

putative transmembrane protein [Oryza sativa (japonica cultivar-group)]

ref|NP_920876.1

2E-22

MZ00012450

3.4

6.5

 

putative amino acid transport protein [Oryza sativa (japonica cultivar-group)]

ref|XP_463772.1

3E-56

MZ00043256

1.5

6.5

 

sorbitol transporter [Malus × domestica]

dbj|BAD42344.1

1E-29

MZ00031622

1.5

  

oligopeptide transporter OPT-like [Oryza sativa (japonica cultivar-group)]

ref|XP_466910.1

1E-80

MZ00001869

 

0.4

0.5

putative organic cation transporter [Oryza sativa (japonica cultivar-group)]

ref|XP_478718.1

0

  1. Legend. C1 refers to the region 1 comparison, C2 to the region 2 comparison, and C2/3 to the comparison of region 2 of water-stressed roots with region 3 of well-watered roots.