Table 2 Gene annotations of the Rps1-k region1
Gene ID | Position2 | Predicted gene annotation | Closest protein homolog | BLASTP E value | Soybean ESTs3 (E ≤ e-50) |
|---|---|---|---|---|---|
1 | 18019–21708 (+) | Rps1-k-1 | Glycine max AY963292 | 0 | 14 |
2 | 42452–46201 (+) | Rps1-k-2 | Glycine max AY963293 | 0 | 14 |
3 | 63302–62705 (-) | CBL-Interacting protein kinase 15 | Arabidopsis thaliana NP_195801 | 6e-69 | 4 |
| Â | Â | Serine/threonine Kinase (partial seudogene) | Persea Americana AAL23677 | 3e-68 | Â |
4 | 69126–68921 (-) | Ribosomal protein S6 | Glycine max AAS47511 | 4e-7 | 17 |
5 | 76950–78815 (+) | Conserved hypothetical protein | Medicago truncatula ABD32262 | 3e-40 | 4 |
6 | 79282–86280 (+) | Gag/pol polyprotein | Pisum sativum AAQ82033 | 0 | 19 |
7 | 90317–92266 (+) | Hypothetical 65 kDa avirulence protein in avrBs3 region | Xanthomonas campestris pv. vesicatoria P14729 | 5e-5 | 7 |
8 | 92658–96559 (+) | Gag-pol polyprotein | Zea Mays AAM94350 | 2e-147 | 21 |
9 | 113419–113916 (+) | NADH dehydrogenase subunit 1 (only the N-terminal 70 aa) | Trichosurus vulpecula NP_149931 | 3.9 | 77 |
10 | 114088–115118 (+) | MAD2 (only the N-terminal 65 aa) | Triticum aestivum BAD90977 | 3e-17 | 5 |
11 | 117048–116804 (-) | Cytochrome c oxidase subunit II (the N-terminal 40 aa) | Cynomys ludovicianus AAK52712 | 5.1 | 2 |
12 | 117709–119789 (+) | Cysteine proteinase Vacuolar processing enzyme precursor (the N-terminal 118 aa) | Glycine max BAA06030 P49045 | 3e-49 | 13 |
13 | 123937–123409 (-) | Unknown protein (partial pseudogene) | Arabidopsis thaliana NP_190603 | 2e-26 | 3 |
14 | 127141–126821 (-) | L-lactate dehydrogenase (partial pseudogene) | Lycopersicon esculentum CAA71611 | 9e-27 | 7 |
15 | 131753–138850 (-) | Glycoside hydrolase Integrase, catalytic region (partial pseudogene) | Medicago truncatula ABD33337 Medicago truncatula ABD32527 | 0 | 6 |
16 | 139054–139575 (+) | Unnamed protein product (C-terminal 173 aa) | Oryza sativa NP_912905 | 5e-60 | 3 |
17 | 140361–140014 (-) | Gag-pol polyprotein | Glycine max AAQ73529 | 1e-34 | 3 |
18 | 145152–148184 (+) | Dynein | Oncorhynchus mykiss CAA33503 | 1e-10 | 4 |
19 | 145722–145277 (-) | Prion-like Q/N-rich domain protein PQN-33 | Gallus gallus XP_428546 | 6e-48 | 3 |
20 | 154355–155745 (+) | Oxidoreductase (pseudogene) | Arabidopsis thaliana NP_201530 | 2e-21 | 7 |
21 | 159487–160392 (+) | Gag/pol polyprotein | Pisum sativum AAQ82037 | 5e-28 | 9 |
22 | 165713–166447 (+) | Glycoside hydrolase, family 1, Zinc finger, CCHC-type; Ribonuclease H fold | Medicago truncatula ABD333337 | 6e-29 | 1 |
23 | 167488–176781 (-) | SIRE1–8 retroelement | Glycine max AY205610 | 0 | 5 |