Skip to main content

Table 3 Tall fescue HSP and heat shock transcription factor (HSF) gene expression

From: Analysis of tall fescue ESTs representing different abiotic stresses, tissue types and developmental stages

Unigene IDa

DR1

DS1

FSS

TFM

HSS

LF1

RT1

ST1

SD1

Annotation

          

Low molecular weight (LMW) HSPs

TC3677

0 b

0

0

0

4

0

0

0

0

UP|HSP11_WHEAT (P12810) 16.9 kDa class I hsp

DT693759

0

0

0

0

2

0

0

0

0

PRF|1908439B|445140|1908439B hsp 16.9B. {O. sativa}

DT696482

0

0

0

0

0

2

0

0

0

UP|Q40866_PENAM (Q40866) hsp 17.0

TC739

0

0

0

0

8

0

0

0

0

UP|Q96458_HORVU (Q96458) 17 kDa class I small hsp

DT706802

0

0

0

0

0

0

0

2

0

PRF|NP_175807.1|17.4 kDa class III hsp {A.thaliana}

TC4040

48

0

0

0

2

0

0

0

0

UP|Q94KM0_WHEAT (Q94KM0) Small hsp HSP17.8

TC2206

0

0

0

0

2

0

2

2

0

UP|Q40867_PENAM (Q40867) hsp 17.9

TC2205

0

0

8

0

12

0

0

0

0

UP|Q8W007_ORYSA (Q8W007) Class I lmw-hsp 17.9

DT684410

0

0

8

0

0

0

0

0

0

UP|Q5R1P5_BOMMO (Q5R1P5) hsp21.4

TC2142

0

0

0

0

4

0

0

0

0

UP|O64960_MAIZE (O64960) lmw-hsp (HSP22)

TC1295

0

0

0

0

4

0

0

0

0

PIR|S65051|S65051 lmw-hsp (Hsp22.5) {G. max}

TC2141

0

0

0

0

28

0

0

0

0

UP|Q9ZP25_WHEAT (Q9ZP25) sm Hsp23.5 precursor

DT695134

0

0

0

0

2

0

0

0

0

UP|Q41568_WHEAT (Q41568)hsp 26.6B

TC2085

0

0

8

0

18

0

0

0

0

UP|Q8GV35_9POAL (Q8GV35) Chl lmw-hsp HSP26.7b

DT685446

0

0

8

0

0

0

0

0

0

UP|Q8GV37_9POAL (Q8GV37) Chl lmw-hsp HSP26.8

DT693763

0

0

0

0

2

0

0

0

0

UP|O80432_LYCES (O80432) Mitochondrial smhsp

TC4358

0

0

0

0

10

0

0

2

0

PDB|1GME_A|1GME_Eukaryotic smhsp {T. aestivum}

TC501

0

0

0

0

12

0

0

0

0

UP|Q40978_PAPSO (Q40978) lmw-hsp

DT695083

0

0

0

0

2

0

0

0

0

UP|Q41218_SOLTU (Q41218) smhsp homolog

DT684541

0

0

8

0

0

0

0

0

0

UP|Q4ZHH0_9BASI (Q4ZHH0) smhsp frag

DT713365

0

0

0

0

0

0

0

0

2

UP|Q58FS1_TRIHA (Q58FS1) smhsp

Unigene ID

DR1

DS1

FSS

TFM

HSS

LF1

RT1

ST1

SD1

Annotation

TC4794

0

0

0

0

4

0

0

0

0

UP|Q8L470_LYCES (Q8L470) smhsp

          

HSP 70

DT679789

0

2

0

0

0

0

0

0

0

GB|CAA54419.1|450880|ATHSC701 hs cognate 70-1 {A. thaliana}

TC64

0

0

0

0

2

0

0

4

0

UP|HSP72_LYCES (P27322) hs cognate 70 kDa prot 2

DT691644

0

0

0

0

2

0

0

0

0

UP|HSP74_HUMAN (P34932) hs 70 kDa protein 4 (HSP70RY)

DT695482

0

0

0

0

2

0

0

0

0

UP|HSP7S_PEA (Q02028) Stromal 70 kDa hs-related protein

DT682340

0

2

0

0

0

0

0

0

0

UP|O50036_SPIOL (O50036) hs 70 protein

DT692072

0

0

0

0

2

0

0

0

0

UP|O04056_CITLA (O04056) hsp precursor

TC63

8

14

0

38

4

4

21

2

0

UP|Q84TA1_ORYSA (Q84TA1) hspgnate 70

          

High molecular weight HSPs

DT692018

0

0

0

0

2

0

0

0

0

UP|Q9ZRG0_WHEAT (Q9ZRG0) hsp

TC149

0

0

0

4

2

4

2

2

0

UP|HSP82_ORYSA (P33126) hsp

TC5768

0

0

0

0

4

0

0

0

0

PIR|A48426|A48426 HSP82 – maize {Z. mays}

TC148

0

0

0

12

2

0

4

10

4

UP|Q7XJ80_HORVU (Q7XJ80) Cytosolic hsp 90

DT684503

0

0

8

0

0

0

0

0

0

UP|Q45XA1_BEMTA (Q45XA1) 90 kDa hsp

DT710057

0

0

0

0

0

0

0

2

0

UP|HS101_ORYSA (Q6F2Y7) hsp 101

DT697638

0

0

0

0

0

2

0

0

0

UP|Q6Z517_ORYSA 101 kDa hsp; HSP101-like

TC2500

0

0

0

0

2

0

0

0

8

UP|Q9LF37_ARATH (Q9LF37) ClpB hsp -like

TC950

0

0

0

2

0

0

0

0

4

UP|HS105_HUMAN (Q92598) hsp 105 kDa

          

Unclassified HSPs

TC5675

0

0

0

0

0

0

0

0

4

UP|O23638_ARATH (O23638) hsp precursor

DT708187

0

0

0

0

0

0

0

2

0

UP|O49457_ARATH (O49457) hsp

TC3195

0

0

0

0

2

0

2

0

0

UP|P93437_ORYSA (P93437) hsp

TC2515

0

4

0

0

0

2

0

0

4

UP|Q43638_SECCE (Q43638) hsp

TC1929

0

0

0

0

4

0

0

0

0

UP|Q4LDR0_LYCES (Q4LDR0) hsp

Unigene ID

DR1

DS1

FSS

TFM

HSS

LF1

RT1

ST1

SD1

Annotation

TC4728

0

0

8

0

4

0

0

0

0

UP|Q5ZBN6_ORYSA (Q5ZBN6) hs-like protein

DT702768

0

0

0

0

0

0

2

0

0

UP|Q6ER93_ORYSA (Q6ER93) hsp -like

TC1335

0

0

0

2

0

0

2

0

0

UP|Q6K2F0_ORYSA (Q6K2F0) hsp -like

TC3822

0

0

0

0

0

0

2

2

0

UP|Q96269_ARATH (Q96269) hsp

TC3007

0

0

0

0

0

0

2

0

4

UP|Q9FHQ0_ARATH (Q9FHQ0) Calmodulin-binding hsp

DT710639

0

0

0

0

0

0

0

2

0

UP|STIP_SOYBN (Q43468) hsp STI (Stress inducible pron) (GmSTI)

DT710259

0

0

0

0

0

0

0

2

0

PRF|NP_175842.1 hs family protein {A. thaliana}

DT690417

0

0

0

2

0

0

0

0

0

PRF|NP_187434.1|NP_187434 hsp -related {A. thaliana}

TC4128

0

4

0

4

4

0

9

4

0

PRF|NP_191819.1 DNAJ hs family protein {A. thaliana}

DT679933

0

2

0

0

0

0

0

0

0

PRF|NP_194764.1 hsp -related {A. thaliana}

          

HSFs

DT694163

0

0

0

0

2

0

0

0

0

UP|Q6VBB5_ORYSA (Q6VBB5) hsf RHSF2

DT694677

0

0

0

0

2

0

0

0

0

GB|AAQ23057.1|33591100|hsf RHSF3 {O. sativa}

DT688511

0

0

0

2

0

0

0

0

0

GB|AAQ23059.1|33591104|hsf RHSF5 {O. sativa}

TC2134

14

0

0

0

10

0

0

0

8

GB|AAQ23060.1|33591106 hsf RHSF6 {O. sativa}

TC5588

0

0

0

0

4

0

0

0

0

GB|AAQ23061.1|33591108|heat shock factor RHSF7 {O. sativa}

DT705016

0

0

0

0

0

0

2

0

0

GB|AAQ23062.1|33591110|hsf RHSF8 {O. sativa}

TC3473

0

0

0

0

4

0

0

0

0

UP|Q657C0_ORYSA (Q657C0) hs tf HSF8-like

DT679516

0

2

0

0

0

0

0

0

0

UP|Q6Z7B3_ORYSA (Q6Z7B3) hsf protein hsf8-like

TC3759

0

0

0

0

0

0

4

0

0

UP|Q94J16_ORYSA (Q94J16) hsf RHSF9

TC1477

0

2

0

0

2

0

0

0

0

UP|Q5Z9D6_ORYSA (Q5Z9D6) hsf RHSF13-like

  1. aUnigene ID. DT = singleton, TC = tentative consensus, Drought stressed root = DR1, Drought stressed shoot = DS1, Field stressed shoot = FSS, Floral meristem = TFM, Heat stressed shoot = HSS, Greenhouse grown leaf = LF1, Greenhouse grown root = RT1, Field grown stem = ST1, Young seedling = SD1.
  2. b Numbers of normalized ESTs found matching known HSPs or HSFs were listed in individual library.
Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us