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Table 2 Predicted targets for the newly identified miRNAs in rice.

From: Identification of novel and candidate miRNAs in rice by high throughput sequencing

miRNA Target gene (number of mismatches between the miRNA and the mRNA is indicated in parentheses) Putative function of the target gene
Osa-miR1436 Os03g26190(3); Os06g23090(3); Os08g36050(1) hypothetical proteins
Osa-miR1432 Os03g59770(1); Os03g59790(1); Os03g59870(1) EF hand proteins
Osa-miR444e Os04g38780(0); Os02g49840(2) MADS-box factor 27; MADS-box factor 57
Osa-miR444c.1 Os02g49840(0); Os04g38780(2); Os08g06510(2) MADS-box factor 57; MADS-box factor 27; zinc finger, C3HC4 type family protein
Osa-miR444f Os04g38780(1); Os02g49840(1); Os08g06510(3) MADS-box factor 27; MADS-box factor 57; zinc finger, C3HC4 type family protein
Osa-miR444c.2 Os04g38780(0); Os02g49840(2) MADS-box factor 27; MADS-box factor 57
Osa-miR444d Os02g49840(0); Os10g27170(3) MADS-box factor 57; calmodulin binding protein
Osa-miR1427 Os04g32560(3); Os06g14810(3) clpA homolog CD4B; 3-ketoacyl-CoA synthase
Osa-miR1425 Os10g35640(2); Os08g01640(3); Os08g01650(3); Os10g35230(3); Os10g35240(3); Os10g35436(3); Os08g01870(3); Os10g35790(3) PPR proteins