Table 6 Haplotypes based on single nucleotide polymorphisms (SNPs) in the p-coumarate 3-hydroxylase (C3H) gene of maize and average phenotypic values of lines included in individual haplotypes. Numbers denote bp position of individual SNPs in the alignment.
From: Characterization of phenylpropanoid pathway genes within European maize (Zea mays L.) inbreds
8 | 59 | 294 | 452 | 479 | 548 | Lines (Total = 24) | NDF | IVDOM | DNDF | |
|---|---|---|---|---|---|---|---|---|---|---|
H_1 | A | G | G | T | G | G | AS01, 08–13, 25–27, 29–32 | 57.1 | 72.9 | 56.5 |
H_2 | . | . | C | C | C | . | AS14 | 56.2 | 72.1 | 54.4 |
H_3 | G | T | . | . | . | . | AS15, 16 | 54.2 | 74.7 | 57.7 |
H_4 | . | . | . | C | T | . | AS02, 05, 07 | 52.4 | 75.8 | 57.7 |
H_5 | . | . | C | . | C | A | AS28 | 61.0 | 67.2 | 49.6 |
H_6 | . | . | . | . | T | . | AS03, 06 | 51.8 | 76.4 | 58.4 |
H_7 | . | . | . | . | C | A | AS04 | 50.8 | 77.3 | 59.6 |