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Table 6 Haplotypes based on single nucleotide polymorphisms (SNPs) in the p-coumarate 3-hydroxylase (C3H) gene of maize and average phenotypic values of lines included in individual haplotypes. Numbers denote bp position of individual SNPs in the alignment.

From: Characterization of phenylpropanoid pathway genes within European maize (Zea mays L.) inbreds

  8 59 294 452 479 548 Lines (Total = 24) NDF IVDOM DNDF
H_1 A G G T G G AS01, 08–13, 25–27, 29–32 57.1 72.9 56.5
H_2 . . C C C . AS14 56.2 72.1 54.4
H_3 G T . . . . AS15, 16 54.2 74.7 57.7
H_4 . . . C T . AS02, 05, 07 52.4 75.8 57.7
H_5 . . C . C A AS28 61.0 67.2 49.6
H_6 . . . . T . AS03, 06 51.8 76.4 58.4
H_7 . . . . C A AS04 50.8 77.3 59.6
  1. NDF: neutral detergent fiber; IVDOM: in vitro digestibility of organic matter; DNDF: digestibility of neutral detergent fiber