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Table 4 Haplotypes based on single nucleotide polymorphisms (SNPs) in the 4-coumarate:CoA ligase 1 (4CL1) gene of maize and average phenotypic values of lines included in individual haplotypes. Numbers denote bp position of individual SNPs in the alignment.

From: Characterization of phenylpropanoid pathway genes within European maize (Zea mays L.) inbreds

  10 31 35 37 56 182 191 218 431 457 481 502 523 675 718 817 844 911 1119 1154 1236 1260 1284 Lines (Total = 27) NDF IVDOM DNDF
  s s s s              s s   s   s s     
H_1 C C T C G G G C T T C T C G T C T G G A G C A AS02, 04, 15, 17, 18, 21, 23, 24, 36 55.3 73.4 56.1
H_2 . . . . A A C A G C G C T A C G . . C . A . . AS03, 06, 08–13, 16, 26–30, 34, 35 56.5 73.2 56.3
H_3 . . . . . A C A G C G C T A C G . . C . A . . AS32 58.0 68.5 50.3
H_4 T T G T . . . . G C G C T . C G C T C G . T C AS31 63.0 71.0 58.4
  1. NDF: neutral detergent fiber; IVDOM: in vitro digestibility of organic matter; DNDF: digestibility of neutral detergent fiber
  2. s: singleton