TY - JOUR AU - Barrière, Y. AU - Emile, J. C. AU - Traineau, R. AU - Surault, F. AU - Briand, M. AU - Gallais, A. PY - 2004 DA - 2004// TI - Genetic variation for organic matter and cell wall digestibility in silage maize. Lessons from a 34-year long experiment with sheep in digestibility crates JO - Maydica VL - 49 ID - Barrière2004 ER - TY - JOUR AU - Barrière, Y. AU - Alber, D. AU - Dolstra, O. AU - Lapierre, C. AU - Motto, M. AU - Ordas, A. AU - Van Waes, J. AU - Vlasminkel, L. AU - Welcker, C. AU - Monod, J. P. PY - 2005 DA - 2005// TI - Past and prospects of forage maize breeding in Europe. I. The grass cell wall as a basis of genetic variation and future improvements in feeding value JO - Maydica VL - 50 ID - Barrière2005 ER - TY - JOUR AU - Barrière, Y. AU - Guillet, C. AU - Goffner, D. AU - Pichon, M. PY - 2003 DA - 2003// TI - Genetic variation and breeding strategies for improved cell wall digestibility in annual forage crops. A review JO - Anim Res VL - 52 UR - https://doi.org/10.1051/animres:2003018 DO - 10.1051/animres:2003018 ID - Barrière2003 ER - TY - JOUR AU - Boerjan, W. AU - Ralph, J. AU - Baucher, M. PY - 2003 DA - 2003// TI - Lignin biosynthesis JO - Annu Rev Plant Biol VL - 54 UR - https://doi.org/10.1146/annurev.arplant.54.031902.134938 DO - 10.1146/annurev.arplant.54.031902.134938 ID - Boerjan2003 ER - TY - JOUR AU - Civardi, L. AU - Rigau, J. AU - Puigdomènech, P. PY - 1999 DA - 1999// TI - Nucleotide Sequence of two cDNAs coding for Caffeoyl-coenzyme A O-Methyltransferase (CCoAOMT) and study of their expression in Zea mays JO - Plant Physiol VL - 120 ID - Civardi1999 ER - TY - JOUR AU - Collazo, P. AU - Montoliu, L. AU - Puigdomenech, P. AU - Rigau, J. PY - 1992 DA - 1992// TI - Structure and expression of the lignin O-methyltransferase gene from Zea maysL JO - Plant Mol Biol VL - 20 UR - https://doi.org/10.1007/BF00027157 DO - 10.1007/BF00027157 ID - Collazo1992 ER - TY - JOUR AU - Gardiner, J. AU - Schroeder, S. AU - Polacco, M. L. AU - Sanchez-Villeda, H. AU - Fang, Z. AU - Morgante, M. AU - Landewe, T. AU - Fengler, K. AU - Useche, F. AU - Hanafey, M. AU - Tingey, S. AU - Chou, H. AU - Wing, R. AU - Soderlund, C. AU - Coe, E. H. PY - 2004 DA - 2004// TI - Anchoring 9,371 maize expressed sequence tagged unigenes to the Bacterial Artificial Chromosome Contig Map by Two-Dimensional Overgo Hybridization JO - Plant Physiol VL - 134 UR - https://doi.org/10.1104/pp.103.034538 DO - 10.1104/pp.103.034538 ID - Gardiner2004 ER - TY - JOUR AU - Guillaumie, S. AU - San Clemente, H. AU - Deswarte, C. AU - Martinez, Y. AU - Lapierre, C. AU - Murigneux, A. AU - Barrière, Y. AU - Pichon, M. AU - Goffner, D. PY - 2007 DA - 2007// TI - MAIZEWALL. Database and developmental gene expression profiling of cell wall biosynthesis and assembly in maize JO - Plant Physiol VL - 143 UR - https://doi.org/10.1104/pp.106.086405 DO - 10.1104/pp.106.086405 ID - Guillaumie2007 ER - TY - JOUR AU - Halpin, C. AU - Holt, K. AU - Chojecki, J. AU - Oliver, D. AU - Chabbert, B. AU - Monties, B. AU - Edwards, K. AU - Barakate, A. AU - Foxon, G. A. PY - 1998 DA - 1998// TI - Brown-midrib maize (bm1) – a mutation affecting the cinnamyl alcohol dehydrogenase gene JO - Plant J VL - 14 UR - https://doi.org/10.1046/j.1365-313X.1998.00153.x DO - 10.1046/j.1365-313X.1998.00153.x ID - Halpin1998 ER - TY - JOUR AU - Pichon, M. AU - Courbou, I. AU - Beckert, M. AU - Boudet, A. -. M. AU - Grima-Pettenati, J. PY - 1998 DA - 1998// TI - Cloning and characterization of two maize cDNAs encoding Cinnamoyl-CoA Reductase (CCR) and differential expression of the corresponding genes JO - Plant Mol Biol VL - 38 UR - https://doi.org/10.1023/A:1006060101866 DO - 10.1023/A:1006060101866 ID - Pichon1998 ER - TY - CHAP AU - Puigdomenech, P. C. AU - Perez, P. AU - Murigneux, A. AU - Martinant, J. P. AU - Tixier, M. H. AU - Rigau, J. AU - Civardi, L. AU - Maes, T. PY - 2001 DA - 2001// TI - Identifying genes associated with a QTL corn digestibility locus BT - Patent ID - Puigdomenech2001 ER - TY - JOUR AU - Rosler, J. AU - Krekel, F. AU - Amrhein, N. AU - Schmid, J. PY - 1997 DA - 1997// TI - Maize phenylalanine ammonia-lyase has tyrosine ammonia-lyase activity JO - Plant Physiol VL - 113 UR - https://doi.org/10.1104/pp.113.1.175 DO - 10.1104/pp.113.1.175 ID - Rosler1997 ER - TY - JOUR AU - Guillaumie, S. AU - Pichon, M. AU - Martinant, J. -. P. AU - Bosio, M. AU - Goffner, D. AU - Barrière, Y. PY - 2007 DA - 2007// TI - Differential expression of phenylpropanoid and related genes in brown-midrib bm1, bm2, bm3, and bm4young near-isogenic maize plants JO - Planta VL - 226 UR - https://doi.org/10.1007/s00425-006-0468-9 DO - 10.1007/s00425-006-0468-9 ID - Guillaumie2007 ER - TY - JOUR AU - Morrow, S. L. AU - Mascia, P. AU - Self, K. A. AU - Altschuler, M. PY - 1997 DA - 1997// TI - Molecular characterization of a brown midrib3 deletion mutation in maize JO - Mol Breed VL - 3 UR - https://doi.org/10.1023/A:1009606422975 DO - 10.1023/A:1009606422975 ID - Morrow1997 ER - TY - JOUR AU - Vignols, F. AU - Rigau, J. AU - Torres, M. A. AU - Capellades, M. AU - Puigdomenech, P. PY - 1995 DA - 1995// TI - The brown midrib3 (bm3) Mutation in Maize Occurs in the Gene Encoding Caffeic Acid O-Methyltransferase JO - Plant Cell VL - 7 UR - https://doi.org/10.1105/tpc.7.4.407 DO - 10.1105/tpc.7.4.407 ID - Vignols1995 ER - TY - JOUR AU - Barrière, Y. AU - Ralph, J. AU - Mechin, V. AU - Guillaumie, S. AU - Grabber, J. H. AU - Argillier, O. AU - Chabbert, B. AU - Lapierre, C. PY - 2004 DA - 2004// TI - Genetic and molecular basis of grass cell wall biosynthesis and degradability. II. Lessons from brown-midrib mutants JO - CR Biol VL - 327 UR - https://doi.org/10.1016/j.crvi.2004.05.010 DO - 10.1016/j.crvi.2004.05.010 ID - Barrière2004 ER - TY - JOUR AU - Cherney, J. H. AU - Cherney, D. J. R. AU - Akin, D. E. AU - Axtell, J. D. PY - 1991 DA - 1991// TI - Potential of brown-midrib, low-lignin mutants for improving forage quality JO - Adv Agron VL - 46 UR - https://doi.org/10.1016/S0065-2113(08)60580-5 DO - 10.1016/S0065-2113(08)60580-5 ID - Cherney1991 ER - TY - JOUR AU - Andersen, J. R. AU - Zein, I. AU - Wenzel, G. AU - Krützfeldt, B. AU - Eder, J. AU - Ouzunova, M. AU - Lübberstedt, T. PY - 2007 DA - 2007// TI - High levels of linkage disequilibrium and associations with forage quality at a Phenylalanine Ammonia-Lyase locus in European maize (Zea mays L.) inbreds JO - Theor Appl Genet VL - 114 UR - https://doi.org/10.1007/s00122-006-0434-8 DO - 10.1007/s00122-006-0434-8 ID - Andersen2007 ER - TY - JOUR AU - Fontaine, A. S. AU - Barrière, Y. PY - 2003 DA - 2003// TI - Caffeic acid O-methyltransferase allelic polymorphism characterization and analysis in different maize inbred lines JO - Mol Breed VL - 11 UR - https://doi.org/10.1023/A:1022116812041 DO - 10.1023/A:1022116812041 ID - Fontaine2003 ER - TY - JOUR AU - Guillet-Claude, C. AU - Birolleau-Touchard, C. AU - Manicacci, D. AU - Fourmann, M. AU - Barraud, S. AU - Carret, V. AU - Martinant, J. P. AU - Barrière, Y. PY - 2004 DA - 2004// TI - Genetic diversity associated with variation in silage corn digestibility for three O-methyltransferase genes involved in lignin biosynthesis JO - Theor Appl Genet VL - 110 UR - https://doi.org/10.1007/s00122-004-1808-4 DO - 10.1007/s00122-004-1808-4 ID - Guillet-Claude2004 ER - TY - JOUR AU - Zein, I. AU - Wenzel, G. AU - Andersen, J. R. AU - Lübberstedt, T. PY - 2007 DA - 2007// TI - Low Level of Linkage Disequilibrium at the COMT (Caffeic Acid O-methyl Transferase) Locus in European Maize (Zea mays L.) JO - Genet Resour Crop Ev VL - 54 UR - https://doi.org/10.1007/s10722-005-2637-2 DO - 10.1007/s10722-005-2637-2 ID - Zein2007 ER - TY - JOUR AU - Flint-Garcia, S. A. AU - Thornsberry, J. M. AU - Buckler, E. S. PY - 2003 DA - 2003// TI - Structure of linkage disequlibrium in plants JO - Annu Rev Plant Biol VL - 54 UR - https://doi.org/10.1146/annurev.arplant.54.031902.134907 DO - 10.1146/annurev.arplant.54.031902.134907 ID - Flint-Garcia2003 ER - TY - JOUR AU - Ching, A. AU - Caldwell, K. S. AU - Jung, M. AU - Dolan, M. AU - Smith, O. S. AU - Tingey, S. AU - Morgante, M. AU - Rafalski, A. J. PY - 2002 DA - 2002// TI - SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines JO - BMC Genet VL - 3 UR - https://doi.org/10.1186/1471-2156-3-19 DO - 10.1186/1471-2156-3-19 ID - Ching2002 ER - TY - JOUR AU - Jung, M. AU - Ching, A. AU - Bhattramakki, D. AU - Dolan, M. AU - Tingey, S. AU - Morgante, M. AU - Rafalski, A. PY - 2004 DA - 2004// TI - Linkage disequilibrium and sequence diversity in a 500-kbp region around the adh1locus in elite maize germplasm JO - Theor Appl Genet VL - 109 UR - https://doi.org/10.1007/s00122-004-1695-8 DO - 10.1007/s00122-004-1695-8 ID - Jung2004 ER - TY - JOUR AU - Stich, B. AU - Melchinger, A. E. AU - Frisch, M. AU - Maurer, H. P. AU - Heckenberger, M. AU - Reif, J. C. PY - 2005 DA - 2005// TI - Linkage disequilibrium in European elite maize germplasm investigated with SSRs JO - Theor Appl Genet VL - 111 UR - https://doi.org/10.1007/s00122-005-2057-x DO - 10.1007/s00122-005-2057-x ID - Stich2005 ER - TY - JOUR AU - Stich, B. AU - Maurer, H. P. AU - Melchinger, A. E. AU - Frisch, M. AU - Heckenberger, M. AU - van der Voort, J. R. AU - Peleman, J. AU - Sørensen, A. P. AU - Reif, J. C. PY - 2006 DA - 2006// TI - Comparison of linkage disequlibrium in elite European maize inbred lines using AFLP and SSR markers JO - Mol Breed VL - 17 UR - https://doi.org/10.1007/s11032-005-5296-2 DO - 10.1007/s11032-005-5296-2 ID - Stich2006 ER - TY - JOUR AU - Thornsberry, J. M. AU - Goodman, M. M. AU - Doebley, J. AU - Kresovich, S. AU - Nielsen, D. AU - Buckler, E. S. PY - 2001 DA - 2001// TI - Dwarf8 polymorphisms associate with variation in flowering time JO - Nat Genet VL - 28 UR - https://doi.org/10.1038/90135 DO - 10.1038/90135 ID - Thornsberry2001 ER - TY - JOUR AU - Yu, J. AU - Buckler, E. S. PY - 2006 DA - 2006// TI - Genetic association mapping and genome organization of maize JO - Curr Opin Biotechnol VL - 17 UR - https://doi.org/10.1016/j.copbio.2006.02.003 DO - 10.1016/j.copbio.2006.02.003 ID - Yu2006 ER - TY - JOUR AU - Gupta, P. K. AU - Rustgi, S. AU - Kulwal, P. L. PY - 2005 DA - 2005// TI - Linkage disequilibrium and association studies in higher plants: Present status and future prospects JO - Plant Mol Biol VL - 57 UR - https://doi.org/10.1007/s11103-005-0257-z DO - 10.1007/s11103-005-0257-z ID - Gupta2005 ER - TY - JOUR AU - Lübberstedt, T. AU - Zein, I. AU - Andersen, J. R. AU - Wenzel, G. AU - Krützfeldt, B. AU - Eder, J. AU - Ouzunova, M. AU - Chun, S. PY - 2005 DA - 2005// TI - Development and application of functional markers in maize JO - Euphytica VL - 146 UR - https://doi.org/10.1007/s10681-005-0892-0 DO - 10.1007/s10681-005-0892-0 ID - Lübberstedt2005 ER - TY - JOUR AU - de Obeso, M. AU - Caparros-Ruiz, D. AU - Vignols, F. AU - Puigdomenech, P. AU - Rigau, J. PY - 2003 DA - 2003// TI - Characterisation of maize peroxidases having differential patterns of mRNA accumulation in relation to lignifying tissues JO - Gene VL - 309 UR - https://doi.org/10.1016/S0378-1119(03)00462-1 DO - 10.1016/S0378-1119(03)00462-1 ID - de Obeso2003 ER - TY - JOUR AU - Guillet-Claude, C. AU - Birolleau-Touchard, C. AU - Manicacci, D. AU - Rogowsky, P. AU - Rigau, J. AU - Murigneux, A. AU - Martinant, J. P. AU - Barrière, Y. PY - 2004 DA - 2004// TI - Nucleotide diversity of the ZmPox3 maize peroxidase gene: Relationships between a MITE insertion in exon 2 and variation in forage maize digestibility JO - BMC Genet VL - 5 UR - https://doi.org/10.1186/1471-2156-5-19 DO - 10.1186/1471-2156-5-19 ID - Guillet-Claude2004 ER - TY - JOUR AU - Andersen, J. R. AU - Lübberstedt, T. PY - 2003 DA - 2003// TI - Functional markers in plants JO - Trends Plant Sci VL - 8 UR - https://doi.org/10.1016/j.tplants.2003.09.010 DO - 10.1016/j.tplants.2003.09.010 ID - Andersen2003 ER - TY - JOUR AU - Whitt, S. R. AU - Wilson, L. M. AU - Tenaillon, M. I. AU - Gaut, B. S. AU - Buckler, E. S. PY - 2002 DA - 2002// TI - Genetic diversity and selection in the maize starch pathway JO - PNAS VL - 99 UR - https://doi.org/10.1073/pnas.202476999 DO - 10.1073/pnas.202476999 ID - Whitt2002 ER - TY - JOUR AU - Remington, D. L. AU - Thornsberry, J. M. AU - Matsuoka, Y. AU - Wilson, L. M. AU - Whitt, S. R. AU - Doebley, J. AU - Kresovich, S. AU - Goodman, M. M. AU - Buckler, E. S. PY - 2001 DA - 2001// TI - Structure of linkage disequilibrium and phenotypic associations in the maize genome JO - PNAS VL - 98 UR - https://doi.org/10.1073/pnas.201394398 DO - 10.1073/pnas.201394398 ID - Remington2001 ER - TY - JOUR AU - Tenaillon, M. I. AU - Sawkins, M. C. AU - Long, A. D. AU - Gaut, R. L. AU - Doebley, J. F. AU - Gaut, B. S. PY - 2001 DA - 2001// TI - Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.) JO - PNAS VL - 98 UR - https://doi.org/10.1073/pnas.151244298 DO - 10.1073/pnas.151244298 ID - Tenaillon2001 ER - TY - JOUR AU - Rohde, A. AU - Morreel, K. AU - Ralph, J. AU - Goeminne, G. AU - Hostyn, V. AU - De Rycke, R. AU - Kushnir, S. AU - Van Doorsselaere, J. AU - Joseleau, J. P. AU - Vuylsteke, M. AU - Van Driessche, G. AU - Van Beeumen, J. AU - Messens, E. AU - Boerjan, W. PY - 2004 DA - 2004// TI - Molecular phenotyping of the pal1 and pal2 mutants of arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.104.023705 DO - 10.1105/tpc.104.023705 ID - Rohde2004 ER - TY - JOUR AU - Shi, C. AU - Uzarowska, A. AU - Ouzunova, M. AU - Landbeck, M. AU - Wenzel, G. AU - Lübberstedt, T. PY - 2007 DA - 2007// TI - Identification of candidate genes associated with cell wall digestibility and eQTL (expression quantitative trait loci) analysis in a Flint × Flint maize recombinant inbred line population JO - BMC Genomics VL - 8 UR - https://doi.org/10.1186/1471-2164-8-22 DO - 10.1186/1471-2164-8-22 ID - Shi2007 ER - TY - JOUR AU - Lee, D. AU - Ellard, M. AU - Wanner, L. A. AU - Davis, K. R. AU - Douglas, C. J. PY - 1995 DA - 1995// TI - The Arabidopsis4-coumarate:CoA ligase (4CL) gene: Stress and developmentally regulated expression and nucleotide sequence of its cDNA JO - Plant Mol Biol VL - 28 UR - https://doi.org/10.1007/BF00042072 DO - 10.1007/BF00042072 ID - Lee1995 ER - TY - JOUR AU - Lee, D. AU - Meyer, K. AU - Chapple, C. AU - Douglas, C. J. PY - 1997 DA - 1997// TI - Antisense Suppression of 4-Coumarate:Coenzyme A Ligase Activity in Arabidopsis Leads to Altered Lignin Subunit Composition JO - Plant Cell VL - 9 UR - https://doi.org/10.1105/tpc.9.11.1985 DO - 10.1105/tpc.9.11.1985 ID - Lee1997 ER - TY - JOUR AU - Franke, R. AU - Hemm, M. R. AU - Denault, J. W. AU - Ruegger, M. O. AU - Humphreys, J. M. AU - Chapple, C. PY - 2002 DA - 2002// TI - The Arabidopsis REF8 gene encodes the 3-hydroxylase of phenylpropanoid metabolism JO - Plant J VL - 30 UR - https://doi.org/10.1046/j.1365-313X.2002.01266.x DO - 10.1046/j.1365-313X.2002.01266.x ID - Franke2002 ER - TY - JOUR AU - Franke, R. AU - Humphreys, J. M. AU - Hemm, M. R. AU - Denault, J. W. AU - Ruegger, M. O. AU - Cusumano, J. C. AU - Chapple, C. PY - 2002 DA - 2002// TI - Changes in secondary metabolism and deposition of an unusual lignin in the ref8 mutant of Arabidopsis JO - Plant J VL - 30 UR - https://doi.org/10.1046/j.1365-313X.2002.01267.x DO - 10.1046/j.1365-313X.2002.01267.x ID - Franke2002 ER - TY - JOUR AU - Ralph, J. AU - Akiyama, T. AU - Kim, H. AU - Lu, F. AU - Schatz, P. F. AU - Marita, J. M. AU - Ralph, S. A. AU - Reddy, M. S. S. AU - Chen, F. AU - Dixon, R. A. PY - 2006 DA - 2006// TI - Effects of Coumarate 3-Hydroxylase Down-regulation on Lignin Structure JO - J Biol Chem VL - 281 UR - https://doi.org/10.1074/jbc.M511598200 DO - 10.1074/jbc.M511598200 ID - Ralph2006 ER - TY - JOUR AU - Reddy, M. S. S. AU - Chen, F. AU - Shadle, G. AU - Jackson, L. AU - Aljoe, H. AU - Dixon, R. A. PY - 2005 DA - 2005// TI - Targeted down-regulation of cytochrome P450 enzymes for forage quality improvement in alfalfa (Medicago sativa L.) JO - PNAS VL - 102 UR - https://doi.org/10.1073/pnas.0505749102 DO - 10.1073/pnas.0505749102 ID - Reddy2005 ER - TY - JOUR AU - Meyer, K. AU - Cusumano, J. C. AU - Sommerville, C. AU - Chapple, C. C. S. PY - 1996 DA - 1996// TI - Ferulate-5-hydroxylase from Arabidopsis thaliana defines a new family of cytochrome P450-dependent monooxygenases JO - PNAS VL - 95 UR - https://doi.org/10.1073/pnas.95.12.6619 DO - 10.1073/pnas.95.12.6619 ID - Meyer1996 ER - TY - JOUR AU - Raes, J. AU - Rohde, A. AU - Christensen, J. H. AU - Van de Peer, Y. AU - Boerjan, W. PY - 2003 DA - 2003// TI - Genome-Wide Characterization of the Lignification Toolbox in Arabidopsis JO - Plant Physiol VL - 133 UR - https://doi.org/10.1104/pp.103.026484 DO - 10.1104/pp.103.026484 ID - Raes2003 ER - TY - JOUR AU - Marita, J. M. AU - Ralph, J. AU - Hatfield, R. D. AU - Chapple, C. PY - 1999 DA - 1999// TI - NMR characterization of lignins in Arabidopsis altered in the activity of ferulate 5-hydroxylase JO - PNAS VL - 96 UR - https://doi.org/10.1073/pnas.96.22.12328 DO - 10.1073/pnas.96.22.12328 ID - Marita1999 ER - TY - JOUR AU - Yu, J. M. AU - Pressoir, G. AU - Briggs, W. H. AU - Bi, I. V. AU - Yamasaki, M. AU - Doebley, J. F. AU - McMullen, M. D. AU - Gaut, B. S. AU - Nielsen, D. M. AU - Holland, J. B. AU - Kresovich, S. AU - Buckler, E. S. PY - 2006 DA - 2006// TI - A unified mixed-model method for association mapping that accounts for multiple levels of relatedness JO - Nat Genet VL - 38 UR - https://doi.org/10.1038/ng1702 DO - 10.1038/ng1702 ID - Yu2006 ER - TY - JOUR AU - Van Soest, P. J. PY - 1963 DA - 1963// TI - Use of detergents in analysis of fibrous feeds. II. A rapid method for determination of fiber and lignin JO - J Assoc Off Agric Cehm VL - 46 ID - Van Soest1963 ER - TY - JOUR AU - Tilley, J. M. A. AU - Terry, R. A. PY - 1963 DA - 1963// TI - A two stage technique for in vitrodigestion of forage crops JO - J Brit Grassl Soc VL - 18 UR - https://doi.org/10.1111/j.1365-2494.1963.tb00335.x DO - 10.1111/j.1365-2494.1963.tb00335.x ID - Tilley1963 ER - TY - JOUR AU - Saghai-Maroof, M. A. AU - Soliman, K. M. AU - Jorgensen, R. A. AU - Allard, R. W. PY - 1984 DA - 1984// TI - Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics JO - PNAS VL - 81 UR - https://doi.org/10.1073/pnas.81.24.8014 DO - 10.1073/pnas.81.24.8014 ID - Saghai-Maroof1984 ER - TY - JOUR AU - Altschul, S. F. AU - Gish, W. AU - Miller, W. AU - Myers, E. W. AU - Lipman, D. J. PY - 1990 DA - 1990// TI - Basic local alignment search tool JO - J Mol Biol VL - 215 UR - https://doi.org/10.1016/S0022-2836(05)80360-2 DO - 10.1016/S0022-2836(05)80360-2 ID - Altschul1990 ER - TY - JOUR AU - Thompson, J. D. AU - Higgins, D. G. AU - Gibson, T. J. PY - 1994 DA - 1994// TI - CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice JO - Nucleic Acids Res VL - 22 UR - https://doi.org/10.1093/nar/22.22.4673 DO - 10.1093/nar/22.22.4673 ID - Thompson1994 ER - TY - STD TI - [http://genes.mit.edu/GENSCAN.html] UR - http://genes.mit.edu/GENSCAN.html ID - ref54 ER - TY - JOUR AU - Rozas, J. AU - Sanchez-DelBarrio, J. C. AU - Messeguer, X. AU - Rozas, R. PY - 2003 DA - 2003// TI - DnaSP, DNA polymorphism analyses by the coalescent and other methods JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btg359 DO - 10.1093/bioinformatics/btg359 ID - Rozas2003 ER - TY - JOUR AU - Tajima, F. PY - 1989 DA - 1989// TI - The effect of change in population size on DNA polymorphism JO - Genetics VL - 123 ID - Tajima1989 ER - TY - STD TI - [http://www2.maizegenetics.net/index.php?page=bioinformatics/tassel/index.html] UR - http://www2.maizegenetics.net/index.php?page=bioinformatics/tassel/index.html ID - ref57 ER - TY - JOUR AU - Gaut, B. S. AU - Long, A. D. PY - 2003 DA - 2003// TI - The lowdown on linkage disequilibrium JO - Plant Cell VL - 15 UR - https://doi.org/10.1105/tpc.150730 DO - 10.1105/tpc.150730 ID - Gaut2003 ER - TY - BOOK AU - Weir, B. S. PY - 1996 DA - 1996// TI - Genetic Data Analysis II PB - Sinauer CY - Sunderland ID - Weir1996 ER - TY - STD TI - [http://www.maizegdb.org/ssr.php] UR - http://www.maizegdb.org/ssr.php ID - ref60 ER - TY - JOUR AU - Pritchard, J. K. AU - Stephens, M. AU - Donnelly, P. PY - 2000 DA - 2000// TI - Inference of Population Structure Using Multilocus Genotype Data JO - Genetics VL - 155 ID - Pritchard2000 ER - TY - JOUR AU - Falush, D. AU - Stephens, M. AU - Pritchard, J. K. PY - 2003 DA - 2003// TI - Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies JO - Genetics VL - 164 ID - Falush2003 ER - TY - JOUR AU - Loiselle, B. A. AU - Sork, V. L. AU - Nason, J. AU - Graham, C. PY - 1995 DA - 1995// TI - Spatial genetic structure of a tropical understory shrub, Psychotria officinalis (Rubiaceae) JO - Am J Bot VL - 82 UR - https://doi.org/10.2307/2445869 DO - 10.2307/2445869 ID - Loiselle1995 ER - TY - JOUR AU - Hardy, O. J. AU - Vekemans, X. PY - 2002 DA - 2002// TI - spagedi: a versatile computer program to analyse spatial genetic structure at the individual or population levels JO - Mol Ecol Notes VL - 2 UR - https://doi.org/10.1046/j.1471-8286.2002.00305.x DO - 10.1046/j.1471-8286.2002.00305.x ID - Hardy2002 ER - TY - JOUR AU - Benjamini, Y. AU - Hochberg, Y. PY - 1995 DA - 1995// TI - Controlling the false discovery rate: a practical and powerful approach to multiple testing JO - J R Statist Soc B VL - 57 ID - Benjamini1995 ER -