Skip to main content

Advertisement

Table 2 Transcript abundance of a subset of P. sylvestris ESTs at 30 d.p.i. determined by qRT-PCR.

From: Transcriptional analysis of Pinus sylvestris roots challenged with the ectomycorrhizal fungus Laccaria bicolor

ID DESCRIPTION Array qPCR
   1 d.p.i. 5 d.p.i 15 d.p.i. 30 d.p.i.
23_G07 putative auxin induced -1,4 -1,0 -1,1 2,5 ± 0,08
NXPV_043_G04_F MtN21 nodulin like protein -1,6 -1,1 -1,2 1,9 ± 1,14
NXSI_021_A09 clavata1 1,2 1,4 -1,0 -2,0 ± 0,05
NXCI_098_F10_F chalcone flavone isomerase 1,0 1,2 1,2 -1,5 ± 0,06
NXCI_055_d02 anthocyanidine synthase 1,4 -1,0 1,1 2,0 ± 0,71
NXSI_012_h05 s adenosylmethionine synthase 1,0 -1,0 1,2 -2,4 ± 0,19
40_A03 membrane intrinsic protein -1,4 -1,3 -1,0 -1,6 ± 0,07
involved in Stress and Defense reactions
NXCI_085_H12_F tau class glutathione S-transferase -1,2 1,6 -1,0 1,5 ± 0,26
NXNV_096_C08_F PR10 1,0 -1,2 -1,6 -1,0 ± 0,06
02_C09 subtilisin like protease precursor 1,1 1,6 1,1 -5,6 ± 0,07
NXNV_162_h07 Thioredoxin -1,2 -1,1 -1,2 1,1 ± 0,14
NXSI_012_D08_F Peroxidase 1,0 1,1 1,3 2,8 ± 0,30
4_G06 antimicrobial peptide 1,2 -1,0 -1,1 -5,6 ± 0,07
NXSI_064_A03_F thaumatin 1,2 -1,2 -1,0 2,1 ± 0,70
involved in Cell Wall Modifications
NXSI_054_F05 glycine-rich protein 1,3 1,0 1,6 -11,5 ± 0,03
NXNV_132_G06 endoglucanase 1 (ec 3.2.1.4) 1,2 1,4 1,0 -2,5 ± 0,16
02_B03 cinnamoyl alcohol dehydrogenase 1,0 -1,1 1,1 1,4 ± 0,49
NXCI_066_h04_F acetoacetyl CoA thiolase 1,1 -1,0 1,0 2,1 ± 0,32
NXNV_164_H08 xyloglucan endotransglycosylase 1,0 -1,2 1,1 -2,8 ± 0,15
34_F04 cinnamoyl CoA reductase 1,2 -1,0 1,0 -3,6 ± 0,22
  1. Fold change (± standard deviation) of a subset of P. sylvestris gene transcripts chosen for their functional relevance and used to monitor their transcript abundance at late stages of ectomycorrhizal development (30 d.p.i.).