Table 4 Differentially expressed proteins in apoplastic washing fluids of leaves of oilseed rape (Brassica napus var. napus) after infection with Verticillium longisporum VL43.
Spot no | Similarity (Organism) Peptide | NCBI (ACC) | Protein score (threshold) | MW | Target peptide | Factor | P |
|---|---|---|---|---|---|---|---|
21 | basic glucanase (Bj) LYDPNQEVLSALR YISVGNEVQPSDPTSR GISGFPPSSGTFTPEFR | gi|86371164 (ABC94638) | 223 (56) | 30722 | S (RC 1) | 3.9 | 0.037 |
β-1,3-glucanase (Ath) LASSQAEADTWVR GISGFPPSSGTFTPEF | gi|6735303 (At3g57240) | 91 (56) | 37632 | S (RC 1) | |||
22 | basic glucanase (Bj) IASSQAEADTWVR LYDPNQEVLSALR YISVGNEVQPSDPTSR GISGFPPSSGTFTPEFR NLFHALVDTVYAALEK GSNIDLLLDVPNPDLQR LDYALFTSPSTVVNDGSNAYR | gi|86371164 (ABC94638) | 405 (56) | 30722 | S (RC 1) | 3.1 | 0.001 |
β-1,3-glucanase (Ath) LASSQAEADTWVR GISGFPPSSGTFTPEFR TYVNNLIQTVK | gi|6735303 (At3g57240) | 180 (56) | 37632 | S (RC 1) | |||
23 | β-1,3-glucanase (Ath) LASSQAEADTWVR GISGFPPSSGTFTPEFR TYVNNLIQTVK GSNIELVLDVPNPDLQR | gi|6735303 (At3g57240) | 222 (56) | 37632 | S (RC 1) | 4.8 | 0.049 |
30 | not identified | 5.8 | 0.007 | ||||
32 | not identified | 8.3 | 0.000 | ||||
34 | basic endochitinase (CHB4) (Bn) DSFINAANTFPNFANSVTR AINGMECNGGNSGAVNAR | gi|584929 (Q06209) | 95 (56) | 29684 | S (RC 1) | 7.7 | 0.009 |
36 | not identified | 4.8 | 0.014 | ||||
51 | basic endochitinase (CHB4) (Bn) DSFINAANTFPNFANSVTR AINGMECNGGNSGAVNAR DYCGQLGVDPGPNLS | gi|584929 (Q06209) | 159 (44) | 29684 | S (RC 1) | 4.2 | 0.020 |
52 | not identified | 3.5 | 0.045 | ||||
53 | not identified | 4.4 | 0.005 | ||||
54 | Korean horseradish peroxidase (Rs) MGDISPLTGSSGEIR | gi|1518388 (X91172) | 94 (44) | 33993 | S (RC 3) | 2.4 | 0.040 |
Peroxidase (Ath) MGDISPLTGSSGEIR | gi|15239075 (At5g05340) | 94 (44) | 34650 | S (RC 1) | |||
55 | not identified | 3.6 | 0.005 |