A putative autonomous 20.5 kb-CACTA transposon insertion in an F3'H allele identifies a new CACTA transposon subfamily in Glycine max

Table 2 Softberry predicted gene exons and deduced from RT-PCR cDNA clones

Softberry-FGENESH Prediction					RT-PCR cDNA cloned sequences
#		Start	End	Length	#		Start	End	Length
	TSS	4709				TSS	4708
1	CDS f	6123	9287	3165	1	CDS f	6143	9319	3177
2	CDS i	9446	9753	306	2	CDS i	9446	9753	308
3	CDS i	9854	10066	213	3	CDS i	9854	10066	213
4	CDS i	10156	10419	264	4	CDS i	10156	10419	264
5	CDS i	10508	11200	693	5	CDS i	10508	11200	693
6	CDS i	11302	11555	252	6	CDS i	11302	11555	254
7	CDS i	11659	11826	165	7	CDS i	11659	11826	168
8	CDS i	11902	12006	102	8	CDS i	11902	12006	105
9	CDS i	12110	12182	72	9	CDS i	12110	12182	73
10	CDS i	12264	12359	96	10	CDS i	12264	12359	96
11	CDS i	12928	13028	99	11	CDS i	12446	13028	583
					12	CDS i	13113	13153	41
					13	CDS i	13254	13331	78
12	CDS i	13509	13671	162	14	CDS i	13505	13671	167
13	CDS i	13844	13948	105	15	CDS i	13844	13948	105
					16	CDS i	14160	14216	57
14	CDS i	14381	14461	81	17	CDS i	14381	14461	81
					18	CDS i	14711	14745	35
15	CDS i	15067	15156	90	19	CDS i	15067	15505	439
					20	CDS i	15614	15659	46
16	CDS i	16207	16482	276	21	CDS i	16207	16482	276
17	CDS i	16542	16573	30
18	CDS i	17132	17314	180	22	CDS i	17132	17314	183
19	CDS i	17573	17681	108
20	CDS i	18574	18621	48	23	CDS i	18574	18621	48
21	CDS l	19016	19072	57	24	CDS i	19016	19079	64
	PolA	19332				PolA	19335

ISSN: 1471-2229