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Figure 9 | BMC Plant Biology

Figure 9

From: A putative autonomous 20.5 kb-CACTA transposon insertion in an F3'H allele identifies a new CACTA transposon subfamily in Glycine max

Figure 9

Schematic representation of F3'H gene sequences in the PI437654 line BAC clone. Three non overlapping sequence contigs-1 (40,518 nt),-2 (23,207 nt) and-3 (9,467 nt) of 71B1 BAC clone were arranged based on the organization of corresponding sequences in scaffold_83 of the 7× Glyma0 sequence assembly (JGI) of cultivar Williams. Contig-1 and -2 sequences are adjacent in Glyma0 assembly in the order shown. Contig-3 sequence is an insertion in the center of contig-1 in the Glyma0 assembly and here it is displayed a top and center of contig-1 to indicate the likely approximate location in 71B1 BAC clone. The sizes and orientations of genes are represented by gray arrows with their respective annotations. F3'H sequences are shown in red. The full length (1,590 bp) F3'H gene maps to Contig-2, and the smaller (504 and 354 bp) fragments with homology to F3'H map to Contig-1. Contig-3 encodes functions of a retrotransposon. The introns of genes are not displayed.

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