Table 7 Differentially-expressed genes between F1 hybrid (LYP9) and its parental lines (93-11 and PA64s)
Genetic class | Subclass | Expression pattern | P-value(total number of DEGs) | |||
|---|---|---|---|---|---|---|
0.05 (191) | 0.01 (89) | |||||
# | % | # | % | |||
Up-regulated | Over-dominance | L > N > P | 5 | 2.6 | 3 | 3.4 |
L > P > N | 0 | 0 | 0 | 0 | ||
L > N = P | 15 | 7.9 | 8 | 9 | ||
High-parent dominance | L = P > N | 18 | 9.4 | 6 | 6.7 | |
L = N > P | 58 | 30.4 | 36 | 40.4 | ||
Additivity | Additivity | N < L < P | 1 | 0.5 | 0 | 0 |
P < L < N | 3 | 1.6 | 0 | 0 | ||
Down-regulated | Low-parent dominance | L = P < N | 26 | 13.6 | 7 | 7.9 |
L = N < P | 59 | 30.9 | 28 | 31.5 | ||
Under-dominance | L < N < P | 2 | 1 | 0 | 0 | |
L < P < N | 0 | 0 | 0 | 0 | ||
L < P = N | 4 | 2.1 | 1 | 1.1 | ||