Skip to main content

Table 4 Transcription factor families that are different between the embryogenic and the non-embryogenic cultures.

From: Genome-wide transcriptional analysis of super-embryogenic Medicago truncatulaexplant cultures

Family

Number of probe sets on array

≥ 2 fold up in embryogenic culture

≥ 2 fold up in non-embryogenic culture

AP2/EREBP

140

 

1 (p = 0.126)

AUX/IAA

25

 

1 (p = 0.024)

bHLH

277

5 (p = 0.005)

 

C2C2-co-like

39

1 (p = 0.140)

 

C2C2-DOF

274

1 (p = 0.654)

 

C2H2

199

2 (p = 0.179)

2 (p = 0.016)

C3H

169

1 (p = 0.480)

 

EIL

6

 

1 (p = 0.006)

GARP-ARR-B

19

1 (p = 0.071)

 

GRAS

75

1 (p = 0.251)

 

MADS

54

1 (p = 0.188)

 

MYB

209

2 (p = 0.193)

 

WRKY

837

6 (p = 0.106)

1 (p = 0.556)

  1. Transcription factors were predicted by homology relationship based on the Database of Arabidopsis Transcription Factors and grouped by families.