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Table 2 Potential metabolic differences in embryogenic and non-embryogenic cultures.

From: Genome-wide transcriptional analysis of super-embryogenic Medicago truncatulaexplant cultures

Embryogenic 2HA culture

   

Pathways

No. E.C. numbers in genome array pathway

No. E.C. numbers expressed ≥ 2.0 fold

P value

Sphingolipid metabolism

11

3

9.60E-03

Stilbene, coumarine and lignin biosynthesis

12

3

1.24E-02

Flavonoid biosynthesis

14

3

1.94E-02

Riboflavin metabolism

7

2

3.33E-02

Biosynthesis of 12-, 14- and 16-membered macrolides

1

1

4.34E-02

Non-embryogenic Jemalong culture

   

Ascorbate and aldarate metabolism

10

2

2.73E-03

Biosynthesis of 12-, 14- and 16-membered macrolides

1

1

8.6E-02

  1. Potential metabolic pathways significantly over-represented (p ≤ 0.05) amongst differentially expressed probe sets at 2.0 fold as determined by PathExpress.