Comparative analysis of ESTs involved in grape responses to Xylella fastidiosa infection

BMC Plant Biology

Table 1 Summary of the ESTs generated from the 12 grape SSH libraries.

Group Category	Lib I.D.	Library description	Total ESTs sequenced	Contigs	Singletons	Non-redundant ESTs	Redundant (%)	Unique (%)
RI	1	infected leaf R	487	89	15	104	78.64	21.36
	2	infected stem R	504	177	114	291	42.26	57.74
	9	Infected shoot R	404	72	45	117	71.04	28.96
RC	4	non-infected leaf R	324	95	28	123	62.04	37.96
	5	non-infected stem R	586	175	79	254	56.66	43.34
	11	non-infected shoot R	415	170	139	309	25.54	74.46
SI	7	infected leaf S	611	86	32	118	80.69	19.31
	3	Infected stem S	290	90	23	113	61.03	38.97
	12	Infected shoot S	446	160	136	296	33.63	66.37
SC	8	non-infected leaf S	589	155	160	315	46.52	53.48
	6	non-infected stem S	715	233	150	383	46.43	53.57
	10	non-infected shoot S	423	59	28	87	79.43	20.57
	Total		5794	1561	949
	Unique			993

The percent unique and redundant ESTs was calculated for each library. Resistant and susceptible genotypes are tagged with "R" and "S" for library description.

ISSN: 1471-2229