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Table 2 Results of AFE analysis in rice and Arabidopsis

From: Systematic analysis of alternative first exons in plant genomes

  

Rice

Arabidopsis

Type I AFE

 

137

99

 

N-terminal diversification

53

20

 

   Overlapping with functional domain

5

1

 

Putative alternative promoter

62

22

 

Both N-terminal and PAP

3

7

 

NMD

47

10

Type II AFE

 

1,241

546

 

N-terminal diversification

213

298

 

   Overlapping with functional domain

56

71

 

Putative alternative promoter

257

352

 

Both N-terminal and PAP

189

244

 

NMD

237

42

Total

 

1,378

645