From: QTL mapping of agronomic traits in tef [Eragrostis tef(Zucc) Trotter]
Traita | Chrom. | Closest locus/locib | Peakc | LOD | R2 | Addd | Exp.e |
---|---|---|---|---|---|---|---|
HD | 13 | RZ251 | 4.47 | 0.16 | 0.01 | e11 | |
MD | 2 | RZ876 ~ RZ962c | RZ876 | 3.08 | 0.34 | -1.70 | e09, e10 |
8 | PALb | 3.42 | 0.20 | -3.14 | e11 | ||
PWt | 2 | RZ876 ~ RZ962c | RZ876 | 3.18 | 0.15 | -0.06 | e05 |
8 | ISSR548a | 3.97 | 0.15 | -0.06 | e06 | ||
10 | TCD52 | 3.51 | 0.19 | -0.08 | e04 | ||
19 | RZ698b | 3.25 | 0.14 | 0.07 | e01 | ||
20 | RZ588 | 3.30 | 0.23 | 0.09 | e07 | ||
PSWt | 2 | PALa | 4.41 | 0.17 | -0.10 | e04 | |
3 | TCD95 | 3.80 | 0.21 | -0.10 | e09 | ||
7 | ISSR811b ~ ISSR840a | ISSR811b | 5.20 | 0.24 | -0.12 | e06, e10 | |
8 | ISSR548a | 3.35 | 0.13 | -0.07 | e06 | ||
10 | TCD52 | 3.99 | 0.27 | -0.12 | e04 | ||
13 | RZ251 | 3.02 | 0.11 | 0.10 | e08 | ||
18 | ISSR840b | 5.45 | 0.24 | 0.13 | e04, e8 | ||
19 | RZ698b | 3.17 | 0.14 | 0.09 | e01 | ||
20 | RZ588 | 3.51 | 0.20 | 0.11 | e07 | ||
100sw | 6 | RM170b | 5.21 | 0.26 | -2.22 | e02, e03 | |
10 | ISSR842c ~ TCD327b | ISSR842c | 6.23 | 0.21 | -1.90 | e03, e07 | |
un | CNLT127-T04 | 5.25 | 0.21 | -1.75 | e05 | ||
un | KSUM222 | 5.78 | 0.30 | -2.49 | e01 | ||
GY | 2 | CNL53 ~ ISSR547 | CNL53 | 4.06 | 0.11 | -1.13 | e04, e06, e08 |
2 | BCD880 | 5.84 | 0.24 | -1.47 | e02 | ||
3 | TCD248 ~ TCD95 | TCD95 | 6.34 | 0.28 | -1.07 | e03, e05, e07, e09, e10, e11 | |
3 | PRSC1_022 | 3.98 | 0.12 | -1.23 | e01 | ||
6 | TCD308 ~ ISSR842b | ISSR549b | 6.36 | 0.20 | -1.61 | e08, e09 | |
7 | ISSR840a | 5.94 | 0.25 | -1.67 | e01, e06, e10 | ||
8 | TCD227a ~ ISSR548a | ISSR548a | 4.88 | 0.15 | -1.02 | e04, e11 | |
8 | TCD323 | 4.92 | 0.15 | -1.12 | e02 | ||
16 | RZ395 ~ RM134 | RZ395 | 3.35 | 0.12 | -0.59 | e05, e09 | |
18 | ISSR840b | 3.48 | 0.12 | 0.97 | e07 | ||
20 | RZ588 | 3.98 | 0.18 | 1.10 | e06, e11 | ||
21 | lfm256 | 5.03 | 0.14 | -1.29 | e05, e03 | ||
SB | 2 | BCD880 | 3.94 | 0.14 | -2.33 | e05 | |
2 | RZ962c | 3.04 | 0.15 | -2.40 | e04 | ||
3 | TCD248 ~ ISSR549a | ISSR549a | 6.57 | 0.19 | -1.63 | e01, e02, e09, e10, e11 | |
6 | RM176 ~ ISSR549b | RM176 | 4.72 | 0.16 | -2.39 | e04, e05, e06, e08, e09 | |
6 | ISSR841b | 3.13 | 0.11 | -1.90 | e03 | ||
7 | CNLT145 | 4.60 | 0.26 | -2.88 | e03 | ||
8 | ISSR548a ~ TCD323 | ISSR548a | 6.60 | 0.21 | -2.28 | e06, e11 | |
10 | TCD52 ~ CNLT78 | 6.32 | 0.26 | -0.90 | e07, e09 | ||
10 | TCD327b | 3.07 | 0.12 | -1.97 | e03 | ||
11 | DupW4 ~ ISSR842e | DupW4 | 3.28 | 0.15 | -1.42 | e10, e11 | |
20 | RZ588 | 4.36 | 0.22 | 1.71 | e10 | ||
Lodg | 1 | TCD99b | 3.87 | 0.25 | -6.12 | e03 | |
8 | PALb | 5.50 | 0.38 | -7.12 | e02 | ||
8 | TCD323 | 5.53 | 0.23 | -6.00 | e05 | ||
un | BCD944a | 5.68 | 0.32 | -7.21 | e05 | ||
un | TCD182a | 4.90 | 0.23 | -5.60 | e02 | ||
CulmL | 2 | RZ876 | 3.67 | 0.23 | -2.18 | e02 | |
3 | TCD95 | 5.92 | 0.21 | -2.28 | e09, e10 | ||
6 | RM170b | 3.34 | 0.12 | -1.92 | e08 | ||
7 | RM124b ~ CNLT145 | CNLT145 | 3.44 | 0.34 | -2.64 | e02 | |
8 | ISSR548a | 3.46 | 0.12 | -1.49 | e11 | ||
11 | DupW4 ~ ISSR842e | ISSR842e | 5.66 | 0.28 | -2.16 | e07, e09, e11 | |
13 | RZ251 | 3.32 | 0.24 | 2.20 | e07, e08 | ||
un | KSUM222 | 3.57 | 0.22 | -2.50 | e01 | ||
CD1 | 2 | RZ876 ~ RZ962c | RZ876 | 4.67 | 0.33 | -0.12 | e05 |
13 | RZ251 | 3.39 | 0.21 | 0.09 | e04 | ||
CD2 | 2 | RZ876 ~ RZ962c | RZ876 | 4.86 | 0.33 | -0.12 | e05 |
PedL | 1 | CDO1160 ~ TCD45 | CDO1160 | 4.23 | 0.19 | -0.86 | e07 |
3 | RM170a | 5.90 | 0.25 | 1.40 | e08 | ||
7 | CNLT145 | 3.17 | 0.11 | -0.94 | e08 | ||
9 | ISSR842h | 3.43 | 0.12 | -0.68 | e01 | ||
10 | ISSR842c | 5.35 | 0.21 | 1.08 | e10 | ||
21 | lfm256 | 3.72 | 0.11 | 0.78 | e02, e04, e11 | ||
un | BCD944a | 4.11 | 0.17 | 1.06 | e04 | ||
un | CNLT12 | 4.05 | 0.17 | 0.98 | e02, e03 | ||
un | DupW216 | 3.32 | 0.35 | -1.12 | e09 | ||
un | ISSR842d | 3.16 | 0.17 | 1.00 | e11 | ||
un | CNLT142-T03 | 3.50 | 0.13 | 0.72 | e01 | ||
PanL | 2 | RZ876 | 3.36 | 0.11 | -1.27 | e03 | |
6 | RM176 | 3.52 | 0.10 | -1.22 | e03, e06 | ||
7 | RM124b | 3.92 | 0.14 | -1.07 | e10 | ||
8 | ISSR548a ~ CD038 | ISSR548a 4.73 | 0.14 | -1.46 | e03 | ||
13 | RZ251 | 4.38 | 0.19 | 1.78 | e05 | ||
20 | RZ588 | 4.00 | 0.22 | 1.36 | e07 | ||
un | ISSR842d | 3.25 | 0.12 | -0.98 | e10 | ||
PH | 2 | RZ876 ~ RZ962c | RZ962c 3.63 | 0.26 | -3.79 | e01, e05 | |
7 | CNLT145 | 3.14 | 0.13 | -3.26 | e04 | ||
8 | ISSR548a | 4.35 | 0.14 | -2.91 | e03 | ||
20 | RZ588 | 3.82 | 0.15 | 2.52 | e07 | ||
Ninter | 2 | RZ876 ~ RZ962c | RZ962c 4.97 | 0.20 | -0.11 | e01, e02, e05 | |
10 | TCD52 | 4.61 | 0.16 | -0.13 | e04 | ||
un | ISSR842d | 3.51 | 0.17 | -0.11 | e01 | ||
Inter1 | 13 | RZ69 ~ RZ251 | RZ69 | 4.20 | 0.22 | 0.62 | e02 |
un | CNLT17 | 4.61 | 0.24 | 0.58 | e02 | ||
un | CNLT142-T03 | 3.95 | 0.18 | -0.30 | e03, e07 | ||
un | RZ961 | 3.66 | 0.33 | 0.84 | e04, e08 | ||
Inter2 | 1 | RZ909a | 4.30 | 0.14 | -0.35 | e07 | |
3 | TCD95 ~ ISSR549a | TCD95 | 4.72 | 0.21 | -0.75 | e06, e07 | |
7 | CNLT145 | 3.02 | 0.14 | -0.57 | e08 | ||
10 | CNLT78 | 3.31 | 0.15 | -0.51 | e01 | ||
13 | RZ467a ~ RZ69 | RZ69 | 3.80 | 0.26 | 0.78 | e01, e02 | |
un | CNLT12 | 4.46 | 0.34 | 0.71 | e02, e03 | ||
un | RZ961 | 3.53 | 0.16 | 0.38 | e07 | ||
Dia | 8 | ISSR548a | 3.11 | 0.15 | -0.07 | e03 | |
Crush2 | 2 | BCD1087a | 3.08 | 0.14 | 0.49 | ||
8 | ISSR548a | 5.31 | 0.17 | -0.48 |