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Table 3 GO analysis of fiber initials.

From: Analysis of gene expression in cotton fiber initials

Description

GO

Count (374)

Total (5494)

P-Value increased

P-Value decreased

ribosomes

GO:0005840

31

82

2.77E-25

 

structural constituents of ribosome

GO:0003735

31

83

3.98E-25

 

ribonuceoprotein complex

GO:0030529

31

92

1.21E-21

 

protein biosynthesis

GO:0006412

44

167

2.33E-21

 

macromolecule biosynthesis

GO:0009059

48

223

2.75E-16

 

intracellular nonmembrane-bound organelle

GO:0043232

34

140

4.19E-14

 

biosynthesis

GO:0009058

65

427

1.33E-10

 

cytosol

GO:0005829

20

50

1.73E-09

 

establishment protein localization

GO:0045184

22

93

2.15E-08

 

protein transport

GO:0015031

21

87

2.61E-08

 

cellular biosynthesis

GO:0044249

54

364

3.76E-08

 

cell organization and biosynthesis

GO:0016043

36

208

1.19E-07

 

localization

GO:0051179

67

515

3.72E-07

 

intrinsic to membrane

GO:0031224

31

174

5.36E-07

 

transport

GO:0006810

66

510

5.83E-07

 

cytoplasmic organization and biogenesis

GO:0007028

11

25

8.83E-06

 

DNA Binding

GO:0003677

6

486

 

1.90E-05

carrier activity

GO:0005386

25

152

0.000107

 

intracellular transport

GO:0046907

21

118

0.000108

 

establishment of cellular localization

GO:0051649

21

118

0.000108

 
  1. Analysis of ontologies of genes increased in expression in 1 dpa fiber initials compared to intact ovules. A description of the GO category, numbers of genes (count) differentially regulated, total number of genes with indicated GO and confidence in increase or decrease are shown.