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Table 2 Mutations discovered in the Nipponbare populations mutagenized with either 1.5% EMS or 1 mM Az-15 mM MNU

From: Discovery of chemically induced mutations in rice by TILLING

Target

Nucleotide Change

Amplicon Position

Effecta

Population

Stock

    

EMS

Az-MNU

 

Os1433

T->C

270

L139P +

X

 

TJ_0516

 

T->A

304

D150E

X

 

TJ_0521

 

G->A

326

A158T +

X

 

TJ_0160

 

A->G

332

K160E

X

 

TJ_0160

 

C->T

595

S194F +

X

 

TJ_0024

 

G->T

950

intron

X

 

TJ_0042

 

C->T

1144

intron

 

X

TT_0028

 

G->A

1314

L213=

X

 

TJ_0478

OsBZIP

C->T

141

L46F

 

X

TT_0370

 

G->A

475

S157N

 

X

TT_0846

 

G->A

530

E175=

X

 

TJ_0747

 

G->A

574

G190E

 

X

TT_0267

 

G->A

640

G212D

 

X

TT_0150

 

G->A

947

E314=

 

X

TT_0781

 

G->A

1012

intron

 

X

TT_0150

 

C->T

1083

L330=

X

 

TJ_0504

OsCALS8R

G->A

93

R291=

X

 

TJ_0461

 

C->T

288

V356=

X

 

TJ_0521

 

A->T

458

Y413F +

 

X

TT_0314

 

A->G

574

I452V

 

X

TT_0044

 

C->T

643

L475=

 

X

TT_0145

 

G->A

843

E541=

X

 

TJ_0143

OsDREB

G->A

203

W21*

 

X

TT_0320

 

G->A

278

E46=

 

X

TT_0781

 

G->A

318

A60T

 

X

TT_0133

 

G->A

558

D140N

 

X

TT_0627

 

C->T

613

S158F

 

X

TT_0593

 

A->C

805

N222T

 

X

TT_0150

 

A->C

805

N222T

 

X

TT_0123

 

G->A

849

V237M

X

 

TJ_0230

 

G->A

913

S258N

X

 

TJ_0676

OsEXTE

C->T

73

intron

 

X

TT_0646

 

A->G

282

E174G

 

X

TT_0682

 

G->A

593

V278I

X

 

TJ_0122

 

C->T

651

S297F

X

 

TJ_0024

 

G->A

697

R312=

 

X

TT_0426

 

A->G

1024

Q421=

 

X

TT_0419

 

G->A

1093

P444=

 

X

TT_0503

 

G->A

1164

C468Y

X

 

TJ_0155

OsMAPK

A->T

254

T331S

 

X

TT_0301

 

T->C

799

G478=

 

X

TT_0399

 

G->A

832

E489=

 

X

TT_0437

 

A->T

1181

M606L

X

 

TJ_0360

OsPITA

G->A

293

D481N

 

X

TT_0515

 

C->T

424

V524=

X

 

TJ_0183

 

T->C

724

L624=

X

 

TJ_0517

 

G->A

802

K650=

X

 

TJ_0162

 

G->A

872

A674T

X

 

TJ_0025

OsR1A

C->T

217

T186I

 

X

TT_0246

 

A->G

389

L243=

 

X

TT_0257

OsRPLD1

C->T

252

T371I +

 

X

TT_0643

OsTPS1

T->C

182

G182=

 

X

TT_0898

 

C->T

364

intron

X

 

TJ_0710

 

C->T

521

intron

X

 

TJ_0476

 

A->T

598

Q205H +

X

 

TJ_0545

 

G->A

1147

intron

X

 

TJ_0415

 

A->T

1458

intron

X

 

TJ_0247

Total

   

27

30

 
  1. a Synonymous (=), nonsense (*), and missense changes are shown, where the amino acid residue number is based on the exon-intron model for the TILLed fragment. Missense changes predicted by the program SIFT to be damaging to the encoded protein are indicated (+). Predicted damaging mutations are highlighted in bold.