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Table 3 Pair-wise sequence amino acids identities of the DBD and full CDS of closest spruce and pine homologs

From: Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca)

 

DNA Binding Domains

Full coding sequences

Amino acids percentage

Identity

Similarity

Identity

Similarity

PgMYB1/PtMYB1

99,1

100

87,1

91,3

PgMYB2/PtMYB2

100

100

88

91,6

PgMYB3/PtMYB3

94,6

95,4

79,2

82,3

PgMYB4/PtMYB4

96,6

97,5

84,1

88,6

PgMYB7/PtMYB7

94,8

96,5

90,4

93,6

PgMYB8/PtMYB8

98,3

100

93,1

95,5

PgMYB5/PtMYB14

88

94,8

67,3

77,4

PgMYB10/PtMYB14

87,8

95,6

64,3

73

PgMYB13/PtMYB14

82,7

92,2

60

70

  1. Percent similarity calculations were performed using pairwise optimal alignment with Bioedit software (Clustal W, matrix blosum62).
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BMC Plant Biology

ISSN: 1471-2229

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