From: Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution
Name | Sequence 5'→3' | Length (nt) | Homolog to known miRNA | Precursor genomic | Precursor EST | Expression verified |
---|---|---|---|---|---|---|
1–22 | AUUGGGACUUGUGCUGGGAC | 20 |  | 1 (gnl|ti|872730449) | n.f. | no |
1–39 | CGUUUCACGUCGGGUUCACC | 20 |  | 1 (gnl|ti|713836555) | n.f. | no |
1–50 | UGGCUGAGUCGAAGGUUGUGC | 21 |  | 1 (gnl|ti|859644225) | n.f. | yes (P/G) |
1–63 | UUGCUGUGCACUACUUAGUA | 20 |  | 2 (gnl|ti|1012878547, gnl|ti|835906822) | 1 (PR_1-63/3-14) | yes (P/G) |
2-1 | GUAGCUUAGCGAGGUGUUGGUA | 22 | Â | 1 (gnl|ti|890552627) | 1 (PR_2-1) | yes (G) |
2–28 | CGCUGUCCAUUCUGAGCAUUG | 21 |  | 1 (gnl|ti|1010151671) | n.f. | yes (P/G) |
2–31a | UGACAACGAGAGAGAGCACGC | 21 | miR535 (ppt, osa) | 3 (gnl|ti|1003237208, gnl|ti|756805268, gnl|ti|872833603) | n.f. | n.e. |
2–42 | GUCAAUUUGGCCGAGUGGUUAAGGC | 25 |  | 1 (gnl|ti|1000320159) | n.f. | n.e. |
2–51 | GAGCUUUCUUCGGUCCAAUA | 20 |  | 1 (gnl|ti|859644225) | n.f. | yes (P) |
2–86a | CCUUAGAGUCGUAGGCCUCUG | 21 | miR1218 (ppt) | 1 (gnl|ti|774610216) | 1 (PR_2-86) | n.e. |
2–88a | UGACAGAAGAGAGUGAGCAC | 20 | miR156 (ath, osa, zma, sbi, sof, gma, ptc, ppt) | 2 (gnl|ti|850661024, gnl|ti|784299453) | n.f. | n.e. |
3–5 | UGAUCAAGUGGAAACUCAGCAAA | 23 |  | 1 (gnl|ti|863031657) | n.f. | no |
3–14 | GCUAGGCAGUGCACAGCGAUA | 21 |  | 1 (gnl|ti|1012878547) | 1 (PR_1-63/3-14) | yes (P/G) |
3–60a | UUCGUGCCAAGCUGUGUGCAAC | 22 | miR536 (ppt) | 2 (gnl|ti|890625113, gnl|ti|869792930) | 1 (PR_3-60) | n.e. |
3–62 | AACUGAGAUACAUCGCAAUCG | 21 |  | 1 (gnl|ti|1029072876) | n.f. | no |
3–91 | GCUGUGUUCUUGUACCUGGG | 20 |  | 1 (gnl|ti|831706876) | n.f. | no |
5–21 | UCUUGUCAAUGUUUAGGGGC | 20 |  | 2 (gnl|ti|891393071, gnl|ti|836345675) | n.f. | yes (P/G) |
5–33a | UUGAGGUGUUUCUACAGGCU | 20 | miR537 (ppt) | 1 (gnl|ti|903313912) | n.f. | n.e. |
4–12 | GGUAAAGUGGCGGCUAGGUUA | 21 |  | 1 (gnl|ti|890397681) | n.f. | no |
4–34a | CGUGGGACAGCAUAGAAUGCG | 21 | miR1212 (ppt, pj) | 1 (gnl|ti|713871562) | n.f. | n.e. |
4–66 | ACGAAGGUCUGCAUCAUAGCCAA | 23 |  | 2 (gnl|ti|1000325696, gnl|ti|816375179) | 1 (PR_4-66) | yes (P) |
4–67b | AUCGUGCCAAGCUUUGUGCUUU | 22 | miR536 (ppt) | 1 (gnl|ti|713832028) | n.f. | n.e. |
4–72b | UUGAGCCGCGCCAAUAUCACA | 21 | miR171 (ath, zma, osa, ptc) | 2 (gnl|ti|1023219413, gnl|ti|993696673) | n.f. | yes (P) |
3–36 | GCUACUUCGGCGGGACAAGAGA | 22 |  | 1 (gnl|ti|1020603193) | n.f. | n.e. |
2–70 | GUUGGAAGCCUUCGUGGGA | 19 |  | n.f. | 1 (PR_2-70) | no |
2–15b | UGACAACGAGAGAGAGUACGCU | 22 | miR535 (ppt, osa) | n.f. | n.f. | n.e. |
3–40b | UGACAGAAGAGAGUGAGCACAU | 22 | miR156 (ath, gma, mtr, osa ptc, sbi, sof, zma, ppt) | n.f. | n.f. | n.e. |
3–44c | UCGGAAGCCUUUGUGGGAGAGGAA | 24 | miR477 (ptc) | n.f. | n.f. | yes (P/G) |
3–54b | CUUGGACUGAAGGGAGCUUUUUUU | 24 | miR319 (ath, gma, ppt, ptc, sbi, sof, zma) | n.f. | n.f. | yes (P/G) |
3–79c | UCAUCCAGGGAGCCAGACAGA | 21 | miR160 (ath, gma, mtr, ptc, osa, sbi, zma) | n.f. | n.f. | no |