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Table 1 Frequencies of non-redundant SSR motifs with respect to repeat numbers and in total as detected with the software MISA in the Physcomitrella patens gene index.

From: Identification of genic moss SSR markers and a comparative analysis of twenty-four algal and plant gene indices reveal species-specific rather than group-specific characteristics of microsatellites

SSR Motif Number of repeats Total
  5 6 7 8 9 10 11 12 13 14 ≥15  
AC/GT n. d. 461 191 70 60 36 18 8 5 6 8 863
AG/CT n. d. 308 150 99 59 38 41 39 38 43 88 903
AT/AT n. d. 80 52 40 41 42 17 12 7 4 12 307
CG/CG n. d. 19 2 1 - - - - - - - 22
AAC/GTT 72 27 17 14 6 1 - 1 - - - 138
AAG/CTT 104 42 28 24 23 3 4 - 1 - - 229
AAT/ATT 34 24 18 11 7 4 3 - 1 - - 102
ACC/GGT 76 38 9 - - - - - - - - 123
ACG/CTG 102 33 13 8 1 2 - - - 1 - 160
ACT/ATG 24 8 3 - 5 1 - - - - - 41
AGC/CGT 123 52 18 11 3 1 2 - - - 1 211
AGG/CCT 144 46 27 9 2 - - - - - - 228
AGT/ATC 51 12 2 3 1 - 1 - - 1 - 71
CCG/CGG 8 1 2 1 - - - - - - - 12
AAAC/GTTT 16 11 5 1 2 - - - - - - 35
AAAG/CTTT 8 1 - - - - 1 - - - - 10
AAAT/ATTT 40 18 5 - - - - - 1 - - 64
AAGG/CCTT 5 2 2 2 1 - - - - - - 12
ACAG/CTGT 4 5 - 1 1 - - - - - - 11
ACAT/ATGT 6 5 4 - 1 - - - - - - 16
ACTC/AGTG 24 12 2 1 - - - - - - - 39
AGAT/ATCT 3 3 3 1 - - - - - - - 10
AGGG/CCCT 7 1 4 - - - - - - - - 12
Other NNNN 37 17 7 3 - - - - - - - 64
NN n. d. 868 395 210 160 116 76 59 50 53 108 2095
NNN 738 283 137 81 48 12 10 1 2 2 1 1315
NNNN 150 75 32 9 5 - 1 - 1 - - 273
NNNNN 32 7 - - - - - - - - - 39
NNNNNN 1 - - - - - - - - - - 1
  1. n. d. = no data