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Table 2 Predicted rice GH family 1 β-glucsidase protein properties and locations.

From: Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 β-glucosidase

Gene name Gene ID Pre-protein Mature protein
   MWa AAb Cleavage sitec MWa AAb pIa N-gly sited Possible destinatione
Os1bglu1 AP003217 (BAD73293) 58.0 516 21–22 55.9 495 7.78 5 Out, per, ERm, ERl
Os1bglu2 AP003570 62.4 561 44–45 57.6 517 5.21 3 M inn, plas, chl, m int
Os1bglu3 AP003570 57.5 514 22–23 55.3 492 7.29 3 Out, per, ERm, ERl
Os1bglu4 AP003349 (BAD82183) 55.3 483 - - - 5.16 0 Per, cyt, m mat, ERm
Os1bglu5 AP003272 (BAD87322) 57.4 513 26–27 54.9 487 5.31 3 Out, per, ERm, ERl
Os3bglu6 AC146619 58.5 521 31–32 55.4 490 6.36 3 Out, per, ERm, ERl
Os3bglu7 AC091670 56.9 504 26–27 54.3 478 8.96 3 Out, per, ERm, ERl
Os3bglu8 AAAA02010831 63.1 568 33–34 59.7 535 6.21 3 Plas, per, ERm, ERl
Os4bglu9 AAAA02014146 58.3 514 28–29 55.6 486 7.73 4 Out, vac, per, ERm
Os4bglu10 AL731582 (CAE05481) 58.1 510 23–24 55.8 487 8.07 4 Out, vac, per, nuc
Os4bglu11 AL731582 (CAE05482) 59.8 530 25–26 57.4 505 7.29 4 Out, vac, per, nuc
Os4bglu12 AAAA02014151 57.5 510 24–25 55.3 486 8.85 6 Out, vac, per, ERm
Os4bglu13 AL731582 (CAE05485) 57.1 506 25–26 54.8 481 6.66 6 Out, vac, per, ERm
Os4bglu14 AL606622 (CAE03397) 58.8 516 23–24 56.4 493 7.69 6 Out, per, ERm, ERl
Os4bglu15 AL606622 (CAE003399) - - - - - - - -
Os4bglu16 AL606622 (CAE54544) 58.6 516 27–28 56.0 489 6.13 4 Out, per, ERm, ERl
Os4bglu17 AL606622 - - - - - - - -
Os4bglu18 AL606659 (CAE54546) 57.6 505 26–27 55.0 479 5.3 1 Out, per, ERm, ERl
Os5bglu19 AC121366 (AAS79738) 59.8 530 31–32 56.2 499 5.05 6 Out, per, ERm, ERl
Os5bglu20 AAAA02016859 58.6 520 30–31 55.1 490 5.23 5 Out, per, ERm, ERl
Os5bglu21 AAAA02016862 59.2 526 34–35 55.3 492 5.67 4 Out, vac, per, ERm
Os5bglu22 AC137618 (AAV31358) 59.5 533 24–25 57.1 509 4.96 5 Out, vac, per, ERm
Os5bglu23 AAAA02016873 58.5 523 27–28 55.8 496 5.19 3 Out, vac, per, ERm
Os6bglu24 AP003543 (BAD61620) 57.8 504 18–19 55.8 486 7.78 5 Out, per, ERm, ERl
Os6bglu25 AP003766 57.2 501 19–20 55.2 482 5.51 2 Out, per, ERm, ERl
Os7bglu26 AP005182 58.5 510 27–28 55.6 483 6.49 6 M inn, per, plas, m int
Os8bglu27 AAAA02025912 56.8 499 19–20 54.8 480 8.36 5 Out, per, ERm, ERl
Os8bglu28 AP006049 (BAC57391) 56.6 500 24–25 53.9 476 8.4 6 M out, vac, out, per
Os9bglu29 AC108758 57.7 508 28–29 54.8 480 8.76 4 Out, per, ERm, ERl
Os9bglu30 AC108758 57.4 500 25–26 54.6 475 6.99 6 Out, vac, per, ERm
Os9bglu31 AC137594 58.4 523 22–23 56.3 501 5.32 2 Out, per, ERm, ERl
Os9bglu32 AAAA02027836 57.1 510 30–31 54.1 480 5.51 2 Out, per, vac, ERm
Os9bglu33 AC137594 56.8 503 30–31 53.8 473 5.62 2 Out, vac, per, ERm
Os10bglu34 AAAA02028915 58.0 510 26–27 55.3 484 6.34 5 Out, per, ERm, ERl
Os11bglu35 AC134047 - - - - - - - -
Os11bglu36 AC135190 73.2 647 26–27 70.8 621 6.1 1 M inn, per, ERm, m int, chl
Os11bglu37 AAAA02030895 - - - - - - - -
Os12bglu38 AL731785 57.0 492 21–22 54.8 471 7.44 5 Out, per, ERm, ERl
Osbglu39 AAAA02042985 53.0 458 - - - 5.91   Per, cyt, m mat, chl
Osbglu40 AAAA02048307 - - - - - - - -
  1. a determined by ProtParam, b AA means number of amino acids, cpredicted by SignalP, dpredicted by NetNGlyc at the Expasy proteomics server [69], ecellular locations predicted by PSORT. Chl: chloroplast; cyt: cytoplasm; ERm: endoplasmic reticulum membrane; ERl: endoplasmic reticulum lumen; m inn, m int, m mat, m out: mitochondria inner membrane, intermembrane space, matrix, outer membrane, respectively; per: peroxisome; plas: plasma membrane; vac: vacuole.