Table 3 Arabidopsis (At) and Populus (Pt) Deg protease gene models (S1 family in MEROPS) corresponding to the names given in the Deg phylogenetic tree.
Group | At name | At number | Populus Gene model | Pt number | Pt name |
|---|---|---|---|---|---|
Deg1 | AtDeg1 | At3g27925 | estExt_Genewise1_v1.C_LG_I2430 | Pt706718 | PtDeg1 |
Deg2 | AtDeg2 | At2g47940 | eugene3.00140795 | Pt572750 | PtDeg2.1 |
| Â | Â | Â | fgenesh4_pg.C_LG_XIV001476 | Pt775566 | PtDeg2.2 |
Deg5 | AtDeg5 | At4g18370 | fgenesh4_pg.C_LG_XI000444 | Pt771291 | PtDeg5.1 |
| Â | Â | Â | fgenesh4_pg.C_scaffold_3341000001 | Pt792125 | PtDeg5.2 |
Deg7 | AtDeg7 | At3g03380 | estExt_fgenesh4_pg.C_LG_II2234 | Pt816849 | PtDeg7.1 |
| Â | Â | Â | eugene3.00040664 | Pt555951 | PtDeg7.2 |
| Â | Â | Â | estExt_Genewise1_v1.C_LG_IV3539 | Pt714140 | PtDeg7.3 |
Deg8 | AtDeg8 | At5g39830 | gw1.IV.4356.1 | Pt199267 | PtDeg8 |
Deg9 | AtDeg9 | At5g40200 | gw1.XV.1425.1 | Pt251989 | PtDeg9.1 |
| Â | Â | Â | estExt_Genewise1_v1.C_LG_XII1032 | Pt728836 | PtDeg9.2 |
Deg10 | AtDeg3 | At1g65630 | Â | Â | Â |
| Â | AtDeg4 | At1g65640 | Â | Â | Â |
| Â | AtDeg6 | At1g51150 | Â | Â | Â |
| Â | AtDeg13 | At5g40560 | Â | Â | Â |
| Â | AtDeg12 | At3g16550 | Â | Â | Â |
| Â | AtDeg11 | At3g16540 | Â | Â | Â |
| Â | AtDeg10 | At5g36950 | gw1.VIII.1400.1 | Pt430673 | PtDeg10.1 |
| Â | Â | Â | eugene3.00101698 | Pt567140 | PtDeg10.2 |
| Â | AtDeg16 | At5g54745 | Â | Â | Â |
Deg14 | AtDeg14 | At5g27660 | grail3.0016016001 | Pt662713 | PtDeg14.1 |
| Â | Â | Â | grail3.0016016101 | Pt662714 | PtDeg14.2 |
Deg15 | AtDeg15 | At1g28320 | eugene3.00040486 | Pt555773 | PtDeg15.1 |
| Â | Â | Â | gw1.124.194.1 | Pt266544 | PtDeg15.2 |
Deg17 | Â | Â | fgenesh4_pg.C_scaffold_193000050 | Pt787034 | PtDeg17.1 |
| Â | Â | Â | eugene3.01930055 | Pt586371 | PtDeg17.2 |
| Â | Â | Â | eugene3.00180012 | Pt577788 | PtDeg17.3 |