Name | Sequence | Size | Use |
---|---|---|---|
1. ABRE5 | 5'AGCTTGCCGGACACGTGGCGCTCTAG3' | 26 mer | Annealed with ABRE3 to form 1X ABRE used in EMSA as probe or competitor |
2. ABRE3 | 5'CTAGAGCGCCACGTGTCCGGCAAGCT3' | 26 mer | ABRE probe in EMSA |
3.4X ABRE | 5'CCTCGAAAGCTTGCCACGTGGCGCCACGTGGCGCCACGTGGCGCCACGTGGATGACGCACAATCCCAC3' | 68 mer | Annealed with 17 LS and filled in by Klenow to form double stranded DNA used as competitor in EMSA |
4.2X ABRC | 5'GTCAGAAAGCTTGCCACGTGGCTGCAGTG CCATTGCCACCGGATCAGCCACGTGGCTCCA GTGCTTGCCACCGGATGACGCACAATCCCAC3' | 92 mer | Annealed with 17 LS and filled in by Klenow to form double stranded DNA and used as competitor in EMSA |
5. 4X DRE | 5'CCACTTGAAGCTTACTACCGACATGAGTTCACTACCGACATGAGTTCACTACCGACATGACGCACAATCCCAC3' | 72 mer | Annealed with 17 LS and filled in by Klenow to form double stranded DNA and used as competitor in EMSA. |
6. 2X ERE | 5'AGCAAGCTTTTTTATTCCCAACAATAGAAAGTCTTGTTTTATTCCCAACAATAGAAAGTCTT GATGACGCACAATCCCAC 3' | 80 mer | Annealed with 17 LS and filled in by Klenow to form double stranded DNA and used as competitor in EMSA |
7. 17 LS | 5'GTGGGATTGTGCGTCAT3' | 17 mer | Preparation of ds Competitor |
8.OSBZ85 | 5'TGTAGATCTCAACAATGGGAAATGACGAAGCTGTAGTTACTCA3' | 43 mer | Amplification of OSBZ8 cDNA by RT-PCR |
9.OSBZ83 | 5'GAGAGATCTTTACTTGAGGCTACAGCATCAGTCGC3' | 36 mer | Amplification of OSBZ8 cDNA by RT-PCR |
10.OSBZ85A | 5'GGCGTGGAAACTGGTGGAGCT3' | 21 mer | For sequencing of cDNA |
11.OSBZ83A | 5'CTTGAGAATTCTAAGCTCCACCAGTTTCCACGCC3' | 34 mer | Amplification of 5'end of OSBZ8 |
12. RAB5 | 5'CGACAAGCTTCACGCGCACAGTACAC ACACAT-3' | 32 mer | Amplification of Rab16A promoter and full length by PCR from genomic DNA |
13. RAB3A | 5'TAGAGCTCGGATCCTCTAGACTGCAGT CATGCTGTGGTGTGCAAGCAGG-3' | 49 mer | Amplification of Rab16A promoter by PCR from genomic DNA |
14. RAB3B | 5'ATAGAGCTCTGGATCCTCAGTGCTGGCCGGGCAGCTT3' | 37 mer | Amplification of Rab16A full length by PCR from genomic DNA |