From: Rapid and accurate pyrosequencing of angiosperm plastid genomes
 | Nandina | Platanus |
---|---|---|
combined run data length | 130503 bp | 136335 bp |
no. of combined data contigs | 8 | 10 |
average contig length | 16313 bp | 13634 bp |
size of largest contig | 35901 bp | 28803 bp |
total no. of reads | 31019 | 23743 |
average read length | 103.6 bp | 99.8 bp |
overall average read depth (incl. one IR) | 24.6× | 17.3× |
overall average read depth (incl. both IRs) | 20.5× | 14.6× |
IR average read depth | 24.2× | 28.2× |
SC average read depth | 24.7× | 14.9× |
proportion of bases ≥ Q40 | 99.8% | 99.4% |
no. of gaps | 9 | 11 |
total gap length | 34 bp | 390 bp |
average gap length | 3.8 bp | 35.5 bp |
no. of zero-length gaps | 7 | 5 |
size of largest gap | 32 bp | 170 bp |