Table 5 Genes co-expressed with the MADS domain factors GAGA1 (upregulated in disc flowers) and GRCD1 (upregulated in ray flowers) across 9 different microarray experiments when correlation coeffiecient >0.8 was used as criterion.
From: Patterns of MADS-box gene expression mark flower-type development in Gerbera hybrida(Asteraceae)
Correlation with GAGA1 | ||
|---|---|---|
Probe name | Correlation | Annotation |
PDY55-2 | 1 | G. hybrida MADS-box protein, GAGA1 |
PDY8-4 | 0.963 | G. hybrida MADS-box protein, GRCD2 |
G0000700006A2 | 0.943 | G. hybrida MADS-box protein, GDEF2-like |
PDY119-4 | 0.936 | G. hybrida MADS-box protein, GDEF2 |
G0000100028F12 | 0.935 | RNA helicase |
PDY55-10 | 0.922 | G. hybrida MADS-box protein, GAGA2 |
PDY55-8 | 0.921 | G. hybrida MADS-box protein, GDEF1 |
G0000200013C10 | 0.917 | G. hybrida MADS-box protein, GAGA1 |
G0000100027H2 | 0.913 | MADS-box protein, GGLO1 |
G0000200001H1 | 0.903 | Nucleoid DNA-binding-like protein. |
G0000400013D7 | 0.892 | G. hybrida MADS-box protein, GDEF2 |
G0000200011D6 | 0.887 | G. hybrida MADS-box protein, GGLO1 |
G0000100019F6 | 0.884 | Putative VIP1 protein |
G1-5B | 0.882 | G. hybrida MADS-box protein, GRCD4 |
PDY55-9 | 0.876 | G. hybrida MADS-box protein, GGLO1 |
G0000200002A7 | 0.856 | CHP-rich zinc-finger protein-like |
G0000700002E7 | 0.850 | Squamosa Promoter Binding Protein-homologue 3 |
G0000100021C10 | 0.840 | Putative transcription factor |
G0000200059G3 | 0.838 | Putative PRP19-like spliceosomal protein |
G0000200004G12 | 0.834 | Putative RNA-binding protein |
G0000100022G6 | 0.832 | MYB-related protein 305 |
G0000400001G12 | 0.831 | MADS-box protein, GRCD2 |
G0000200006H5 | 0.829 | Putative TATA binding protein-associated factor |
G0000300021A5 | 0.818 | Putative RING zinc-finger protein |
PHEP7 | 0.805 | G. hybrida MADS-box protein, GSQUA1 |
Correlation with GRCD1 | Â | Â |
Probe name | Correlation | Annotation |
PGTY3 XHO | 1 | G. hybrida MADS-box protein, GRCD1 |
G0000100015G4 | 0.988 | MADS-box protein, GRCD1 |
G0000300001D6 | 0.929 | MYB26 |
G0000700011D8 | 0.915 | Pollen specific LIM-domain protein 1B |
G0000800020B7 | 0.902 | Putative RNA binding protein |
G0000500017B2 | 0.879 | NAM-like protein |
G0000200011F5 | 0.861 | Nucleoid DNA-binding-like protein |
G1-21A03 | 0.834 | G. hybrida MADS-box protein, Tm3-like |
G0000700003A3 | 0.826 | MADS-box protein, GRCD5 |
G0000100001D9 | 0.814 | DNA-binding protein, GBP16. |
G0000200014A7 | 0.801 | MADS-box protein, GRCD3 |