From: Development of ESTs from chickpea roots and their use in diversity analysis of the Cicergenus
Marker | SSR motif | Annotation | Product size (bp) | No. of alleles | PIC |
---|---|---|---|---|---|
AGLC2 | Â | Valyl tRNA synthetase | 620 | 2 | 0.50 |
AGLC7 |  | D-3-phosphoglycerate dehydrogenase | 330–335 | 2 | 0.44 |
AGLC8 |  | RNA helicase | 525–550 | 5 | 0.78 |
AGLC9 | Â | Unknown protein | 680 | 4 | 0.62 |
AGLC14 |  | Hypothetical protein | 520–600 | 2 | 0.45 |
AGLC15 |  | Hypothetical protein | 520–600 | 4 | 0.65 |
AGLC16 |  | WD-repeat protein like | 365–370 | 2 | 0.32 |
AGLC19 |  | Formin-like protein | 350–355 | 4 | 0.50 |
AGLC20 |  | Type IIB calcium ATPase | 230–235 | 3 | 0.61 |
AGLC27 |  | Putative Scarecrow gene regulator | 330–335 | 3 | 0.43 |
AGLC28 |  | Type 2A protein phosphatase | 335–350 | 3 | 0.86 |
AGLC29 |  | Non-specific lipid transfer protein | 325–400 | 6 | 0.64 |
AGLC34 | AG(20) | Putative protein kinase | 350–600 | 5 | 0.75 |
AGLC39 | AG(17) | No significant homology | 275–290 | 3 | 0.74 |
AGLC45 |  | Probable cysteine proteinase (EC 3.4.22.-) | 410–420 | 2 | 0.29 |
AGLC47 |  | (NM_127184) putative beta-ketoacyl-CoA synthase | 200–210 | 2 | 0.59 |
AGLC48 |  | Putative peroxisome assembly factor-2 (NM_100181) | 400–410 | 3 | 0.89 |
AGLC51 |  | RNA binding protein | 170–180 | 4 | 0.55 |
AGLC52 |  | Protein kinase | 390–410 | 6 | 0.89 |
AGLC53 |  | Acyl- [acyl-carrier protein] desaturase | 390–400 | 5 | 0.87 |
AGLC55 | CT(17) | Putative protein kinase | 225–275 | 4 | 0.89 |
AGLC57 | GGA(3) | Unknown protein; protein | >1000 | 3 | 0.56 |
AGLC60 | TTC(3) | Hypothetical protein | 310–350 | 7 | 0.82 |
AGLC61 | GAA(3) | Protein of unknown function | 450–470 | 5 | 0.55 |
AGLC64 | TTC(6) | No significant homolgy | 270–360 | 4 | 0.20 |
AGLC66 |  | Probable cysteine protenase (EC 3.4.22.-) | 500–650 | 8 | 0.63 |
AGLC67 | TCT(4) | Tryptophan synthase beta-subunit (TSB2) | >1000 | 4 | 0.56 |
AGLC68 |  | Lon protease homolog 1 precursor | 220–230 | 3 | 0.39 |
AGLC72 |  | Putative Grr1 protein | 230–250 | 4 | 0.62 |
AGLC74 | TTTA(3) | Glycosyl hydrolase family 17 | 400–450 | 5 | 0.75 |
AGLC75 | AAC(5) | No significant homology | 200–230 | 3 | 0.48 |
AGLC76 | AAG(3) | RGA2 protein Arabidopsis thaliana | 440–480 | 3 | 0.71 |
AGLC78 | CAA(5) | Translation initiation factor eIF3 – like protein | 430–450 | 2 | 0.44 |
AGLC79 |  | No significant homology | 330–410 | 5 | 0.03 |
AGLC82 |  | Unknown protein; protein id: At1g80280.1 | 300–320 | 3 | 0.50 |
AGLC83 | Â | Putative valyl tRNA synthetase [Oryza sativa-japonica cultivar-group] | >1000 | 3 | 0.74 |
AGLC84 | AAG(3) | DEAD/DEAH box RNA helicase | 430–450 | 3 | 0.42 |
AGLC85 |  | Emb trypsin inhibitor cme precursor | 410–450 | 3 | 0.47 |
AGLC88 | Â | Chromomethylase CMT2 Arabidopsis thaliana | >1000 | 5 | 0.78 |
AGLC93 | Â | BZIP family transcription factor | >1000 | 2 | 0.51 |
AGLC94 |  | T48 ankyrin-like protein | 480–500 | 4 | 0.67 |
AGLC96 |  | Hypothetical protein CAB95829.1 | 310–360 | 5 | 0.59 |
AGLC98 | AG(19) | Hypothetical protein | 405–450 | 5 | 0.78 |
AGLC101 |  | No Significant homology | 370–400 | 4 | 0.70 |