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Table 3 List of duplicated microsatellites in the octoploid Holiday x Korona map

From: Genomic rearrangements and signatures of breeding in the allo-octoploid strawberry as revealed through an allele dose based SSR linkage map

Marker HxK nr of distinct alleles Mapped LGs Pseudomolecules_v1.1_sign_hits Transposable element (LTRharvest) Inside gene sequence Large gene family Similarity of best_scaffold 4 k region
BFACT041 21 1,4 0,1,2,3,4,5,6,7 n y y Fragaria x ananassa beta-1,3-glucanase (BG2-2) gene
BFACT048 17 1,2,3,4,5,7 2,3,4,5,6,7 y y y Within intron of populus trichocarpa cytochrome P450 (CYP721)
CFVCT005 12 1,4,6 0,1,2,3,4,7 y n n Not within region with apparant function
CFVCT008 6 4,5,6,7 0,1,2,3,4,5,6,7 n y y Fragaria x ananassa beta-1,3-glucanase (BG2-2) gene, complete cds
CFVCT018 24 1,2,7 0,1,2,3,4,5,6,7 n n n Not within region with apparant function
CFVCT023 12 5,7 7 n n n Not within region with apparant function
CFVCT032 12 3,4,7 0,1,2,3,4,5,6 n n n Not within region with apparant function
EMFn181 33 1,3,4,5,6,7 3,4,5,6 n n n Not within region with apparant function
EMFn198 12 1,3,4,6 no hits     no scaffold
EMFn225 8 5,6 0,1,2,3,4,5,6,7 n n n Not within region with apparant function
EMFn230 4 1,6 no hits     no scaffold
EMFv019 7 1,3 1 n n n Not within region with apparant function
EMFv104 11 3,6 3,6 y y n Within intron of ferredoxin-dependent glutamate synthase
EMFv142 10 2,4 3,4,7 n y y Within intron of adiponectin receptor protein 1-like (LOC100777701), mRNA
EXP1A 14 4,7 3,5,6,7 n y y Expansin (EXP2)
Fvi6B 14 3,6 6 n y y Within intron of chromatin remodeling complex subunit (CHR923)
UDF004 7 3,5 3 n y n Within intron of molybdopterin cofactor sulfurase (ABA3)
UDF033 14 1,2,3 3,4,7 y y n Pyrus pyrifolia genes for F-box proteins and S2-RNase, complete cds, haplotype: S2
UDF056 5 2,3 4,6 y n n Not within region with apparant function