From: Quantitative trait loci affecting reproductive phenology in peach
QTL region | Peach model (gene) | Genomic location (Mb) | Blastp hit in Arabidopsis | E-value | Description |
---|---|---|---|---|---|
1b | ppa000228m | 33.9 | PKL | 0 | Chromatin remodelling factor PICKLE |
 | ppa008143m | 34.3 | COL4 | 2×10-140 | Zinc finger protein CONSTANS-LIKE 4 |
 | ppa003748m | 34.8 | HAB1 | 8×10-177 | Protein phosphatase 2C |
 | ppa006590m | 35.0 | HDA2 | 0 | Histone deacetylase 2 |
 | ppa008979m | 35.9 | At5g67300 | 2×10-95 | myb-related protein |
 | ppa006503m | 36.2 | AREB1 | 3×10-121 | ABA-responsive element binding protein 1 |
 | ppa000318m | 37.0 | EMF1 | 8×10-44 | Embryonic flower 1 |
 | ppa013757m | 37.6 | FPF1 | 8×10-57 | Flowering promoting factor 1 |
 | ppa000056m | 39.8 | EFS | 0 | Histone-lysine N-methyltransferase |
 | ppa001566m | 40.0 | SWI3C | 0 | SWI/SNF complex subunit SWI3C |
 | ppa005747m | 40.8 | HAM2 | 0 | Histone acetyltransferase of the MYST family |
 | ppa024363m | 41.0 | AREB3 | 3×10-45 | ABA-responsive element binding protein 3 |
 | ppa012329m | 46.0 | At4g24440 | 3×10-68 | Transcription initiation factor IIA subunit 2 |
 | ppa010714m (DAM6) | 46.3 | SVP | 7×10-65 | MADS-box protein |
 | ppa010822m (DAM5) | 46.4 | SVP | 1×10-62 | MADS-box protein |
 | ppa011123m (DAM4) | 46.4 | AGL24 | 2×10-60 | MADS-box protein |
3a | ppa020502m | 0.1 | CCR2 | 2×10-19 | Glycine-rich protein |
 | ppa004975m | 0.1 | SDG40 | 0 | SET domain group 40 |
 | ppa000162m | 1.2 | HAC1 | 0 | Histone acetyltransferase of the CBP family |
 | ppa013609m | 1.7 | At1g54070 | 1×10-19 | Dormancy/auxin associated family protein |
 | ppa004252m | 2.4 | HAB1 | 0 | Protein phosphatase 2C |
 | ppa002515m | 3.2 | ABO5 | 0 | Pentatricopeptide repeat-containing protein |
4b | ppa010982m | 10.4 | ERF4 | 6×10-45 | Ethylene responsive element binding factor 4 |
 | ppa022739m | 10.5 | SPL4 | 3×10-41 | Squamosa promoter binding protein-like 4 |
 | ppa008301m | 11.1 | ANAC072 | 2×10-122 | NAC domain-containing protein 72 |
 | ppa002986m | 12.0 | DFL1 | 0 | Indole-3-acetic acid amido synthetase |
6a | ppa003113m | 3.8 | EIL3 | 0 | Ethylene-insensitive3-like 3 |
 | ppa001557m | 6.8 | ARF4 | 0 | Auxin response factor 4 |
 | ppa002082m | 7.1 | ARF10 | 0 | Auxin response factor 10 |
6b | ppa009583m | 8.7 | HDT3 | 3×10-44 | Histone deacetylase 2C |
 | ppa006053m | 9.1 | HDA9 | 0 | Histone deacetylase 9 |
 | ppa007108m | 11.6 | HDA8 | 0 | Histone deacetylase 8 |
 | ppa022266m | 13.7 | AREB3 | 2×10-59 | ABA-responsive element binding protein 3 |
7b | ppa024294m | 12.4 | ATXR4 | 4×10-140 | Histone-lysine N-methyltransferase |
 | ppa026273m | 13.4 | At5g42560 | 1×10-74 | ABA-responsive protein (TB2/DP1, HVA22) |
 | ppa012369m | 14.3 | TFL1 | 7×10-93 | Phosphatidylethanolamine-binding protein |
 | ppa015643m | 14.5 | CBF2 | 1×10-48 | C-repeat/DRE binding factor 2 |
 | ppa009356m | 14.7 | HDT3 | 6×10-57 | Histone deacetylase 2C |
 | ppa001213m | 15.4 | CLF | 0 | Histone-lysine N-methyltransferase |
 | ppa002248m | 15.6 | ABA1 | 0 | Zeaxanthin epoxidase |
 | ppa012239m | 16.4 | At4g37220 | 7×10-25 | Cold acclimation protein WCOR413 family |
 | ppa001803m | 16.7 | DDM1 | 0 | Chromatin remodelling factor |