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Table 2 Number of reads (Millions) that were categorized from reference mapping RNA-seq reads

From: Polyploidy and the petal transcriptome of Gossypium

Accessions A- Reads D- Reads X Reads N Reads Mapped total Mapped%
G. arboreum 16.5 0.1 0 14 30.8 73.30%
G. raimondii 0 17.1 0 16.5 33.9 84.70%
Diploid F1-Hybrid 8 8.4 0.1 15.1 32 78.80%
G. hirsutum Maxxa 7 6.7 1.2 13.5 28.6 77.70%
G. hirsutum Tx2094 8 7.7 1.4 15.7 33.1 76.60%
G. tomentosum 7.3 6.9 1.3 14.2 29.8 77.60%
Total 46.8 46.9 4.1 88.9 188.2 78.10%
  1. A- and D-reads were categorized as belonging to the A- and D-genomes. X-reads exhibited a mixed signal, with evidence for both genomes. N-reads did not overlap a known homoeo-SNP and could not be categorized.