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Table 2 Number of reads (Millions) that were categorized from reference mapping RNA-seq reads

From: Polyploidy and the petal transcriptome of Gossypium

Accessions

A- Reads

D- Reads

X Reads

N Reads

Mapped total

Mapped%

G. arboreum

16.5

0.1

0

14

30.8

73.30%

G. raimondii

0

17.1

0

16.5

33.9

84.70%

Diploid F1-Hybrid

8

8.4

0.1

15.1

32

78.80%

G. hirsutum Maxxa

7

6.7

1.2

13.5

28.6

77.70%

G. hirsutum Tx2094

8

7.7

1.4

15.7

33.1

76.60%

G. tomentosum

7.3

6.9

1.3

14.2

29.8

77.60%

Total

46.8

46.9

4.1

88.9

188.2

78.10%

  1. A- and D-reads were categorized as belonging to the A- and D-genomes. X-reads exhibited a mixed signal, with evidence for both genomes. N-reads did not overlap a known homoeo-SNP and could not be categorized.