Skip to main content

Table 4 Comparison with P. euphratica dataset and pairwise comparisons in R. stricta

From: The temporal foliar transcriptome of the perennial C3 desert plant Rhazya stricta in its natural environment

Genbank ID

Function

Apical leaves

Mature leaves

Morning – midday

Midday – dusk

Dusk - morning

Morning – midday

Midday – dusk

Dusk - morning

15 *

16 ***

22 ***

25*

20 ***

26 ***

AJ780423

Cysteine protease

0

0

0

1

1

0

AJ780552

Cysteine protease

0

0

0

1

1

0

AJ780577

Cysteine protease

0

0

0

1

1

0

AJ771356

Sporulation protein-related

0

0

1

1

1

1

AJ771208

Polyubiquitin-like protein

1

0

0

1

0

0

AJ780294

Cysteine protease

0

0

1

0

0

0

AJ779452

Cysteine protease

0

0

1

0

0

0

AJ778920

Putative beta-1,4-N-acetylglucosaminyltransferase

0

0

0

1

0

1

AJ770693

Metallothionein type 3b

0

1

1

0

0

0

AJ772333

ATP-dependent Clp protease ATP-binding subunit clpA

0

0

0

1

0

0

AJ779386

Osmotin-like protein

0

0

0

1

0

1

AJ779694

Plastid terminal oxidase

1

0

1

1

0

0

AJ778685

Aluminium induced protein

0

1

0

0

1

1

AJ767463

Putative phospholipase C

1

0

1

0

1

1

AJ778911

Alanine aminotransferase

0

0

0

1

0

1

AJ769778

Beta-amylase

1

1

1

1

1

1

AJ769912

Granule-bound starch synthase

0

1

1

0

1

1

AJ769227

Galactinol synthase, isoform GolS

0

0

0

0

1

1

AJ767459

Galactinol synthase, isoform GolS

0

0

0

0

1

1

AJ771722

Transketolase, chloroplast

0

0

1

0

0

1

AJ770033

Ferritin

1

0

1

1

1

1

AJ771629

Flavonol 3-O-glucosyltransferase

1

1

1

1

1

1

AJ780435

Aldehyde dehydrogenase

0

0

0

0

0

0

AJ776096

Alcohol dehydrogenase

1

1

0

1

0

0

AJ768966

Glutamine synthetase

0

0

0

1

0

1

AJ767241

Ribulose bisphosphate carboxylase/oxygenase activase

1

1

1

1

1

1

AJ780215

Endomembrane-associated protein

0

1

1

0

0

0

AJ773744

1,4-Benzoquinone reductase-like, Trp repressor binding protein-like

0

0

0

1

1

1

AJ780732

Drought responsive ATP-binding motif containing protein

1

1

1

1

1

1

AJ778477

High mobility group B3 protein

1

1

0

1

1

1

AJ777667

Chalcone synthase

1

1

1

0

0

1

AJ776763

Chalcone synthase

1

1

1

0

0

1

AJ768632

Lipid transfer protein

0

0

1

0

0

1

AJ772852

Proline-rich protein/Lipid transfer protein

1

0

1

1

0

1

AJ771577

Putative aquaporin (tonoplast intrinsic protein gamma)

0

1

1

1

1

1

AJ774243

Trans-cinnamate 4-monooxygenase

1

1

1

1

1

1

AJ770887

Chlorophyll a/b-binding protein

1

1

1

1

1

1

AJ775526

Glutathione S-transferase

0

1

1

0

1

1

AJ775425

Proline-rich protein

0

0

0

1

0

0

AJ773383

Proline-rich protein

0

0

0

1

0

0

  1. Table shows P. euphratica Genbank codes and functional description (columns 1-2 respectively), columns 3-5 show overlap between apical leaves and columns 6-8 for mature leaves. The row below indicates the pairwise comparison where significant DE genes were found. Below shows the number of homologs detected and hypergeometric test for overlap. The main body of the table indicates if at least one DE homolog was detected by ‘1’ and no homologous DE genes by ‘0’.