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Table 4 Comparison with P. euphratica dataset and pairwise comparisons in R. stricta

From: The temporal foliar transcriptome of the perennial C3 desert plant Rhazya stricta in its natural environment

Genbank ID Function Apical leaves Mature leaves
Morning – midday Midday – dusk Dusk - morning Morning – midday Midday – dusk Dusk - morning
15 * 16 *** 22 *** 25* 20 *** 26 ***
AJ780423 Cysteine protease 0 0 0 1 1 0
AJ780552 Cysteine protease 0 0 0 1 1 0
AJ780577 Cysteine protease 0 0 0 1 1 0
AJ771356 Sporulation protein-related 0 0 1 1 1 1
AJ771208 Polyubiquitin-like protein 1 0 0 1 0 0
AJ780294 Cysteine protease 0 0 1 0 0 0
AJ779452 Cysteine protease 0 0 1 0 0 0
AJ778920 Putative beta-1,4-N-acetylglucosaminyltransferase 0 0 0 1 0 1
AJ770693 Metallothionein type 3b 0 1 1 0 0 0
AJ772333 ATP-dependent Clp protease ATP-binding subunit clpA 0 0 0 1 0 0
AJ779386 Osmotin-like protein 0 0 0 1 0 1
AJ779694 Plastid terminal oxidase 1 0 1 1 0 0
AJ778685 Aluminium induced protein 0 1 0 0 1 1
AJ767463 Putative phospholipase C 1 0 1 0 1 1
AJ778911 Alanine aminotransferase 0 0 0 1 0 1
AJ769778 Beta-amylase 1 1 1 1 1 1
AJ769912 Granule-bound starch synthase 0 1 1 0 1 1
AJ769227 Galactinol synthase, isoform GolS 0 0 0 0 1 1
AJ767459 Galactinol synthase, isoform GolS 0 0 0 0 1 1
AJ771722 Transketolase, chloroplast 0 0 1 0 0 1
AJ770033 Ferritin 1 0 1 1 1 1
AJ771629 Flavonol 3-O-glucosyltransferase 1 1 1 1 1 1
AJ780435 Aldehyde dehydrogenase 0 0 0 0 0 0
AJ776096 Alcohol dehydrogenase 1 1 0 1 0 0
AJ768966 Glutamine synthetase 0 0 0 1 0 1
AJ767241 Ribulose bisphosphate carboxylase/oxygenase activase 1 1 1 1 1 1
AJ780215 Endomembrane-associated protein 0 1 1 0 0 0
AJ773744 1,4-Benzoquinone reductase-like, Trp repressor binding protein-like 0 0 0 1 1 1
AJ780732 Drought responsive ATP-binding motif containing protein 1 1 1 1 1 1
AJ778477 High mobility group B3 protein 1 1 0 1 1 1
AJ777667 Chalcone synthase 1 1 1 0 0 1
AJ776763 Chalcone synthase 1 1 1 0 0 1
AJ768632 Lipid transfer protein 0 0 1 0 0 1
AJ772852 Proline-rich protein/Lipid transfer protein 1 0 1 1 0 1
AJ771577 Putative aquaporin (tonoplast intrinsic protein gamma) 0 1 1 1 1 1
AJ774243 Trans-cinnamate 4-monooxygenase 1 1 1 1 1 1
AJ770887 Chlorophyll a/b-binding protein 1 1 1 1 1 1
AJ775526 Glutathione S-transferase 0 1 1 0 1 1
AJ775425 Proline-rich protein 0 0 0 1 0 0
AJ773383 Proline-rich protein 0 0 0 1 0 0
  1. Table shows P. euphratica Genbank codes and functional description (columns 1-2 respectively), columns 3-5 show overlap between apical leaves and columns 6-8 for mature leaves. The row below indicates the pairwise comparison where significant DE genes were found. Below shows the number of homologs detected and hypergeometric test for overlap. The main body of the table indicates if at least one DE homolog was detected by ‘1’ and no homologous DE genes by ‘0’.