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Table 2 Grapevine homologs to Arabidopsis UV-B signalling pathway proteins

From: Solar ultraviolet radiation is necessary to enhance grapevine fruit ripening transcriptional and phenolic responses

Protein

ID

Length (aa)

Query coverage (%)

Identity (%)

23 ºBrix (FUV+/FUV-)a

26 ºBrix (FUV+/FUV-)a

P b

UVR8 (AT5G63860, 440 aa)

VvUVR8

VIT_07s0031g02560

445

98

82

0.03

0.07

-

HY5 (AT5G11260, 168 aa)

VvHY5-1

VIT_04s0008g05210

169

100

78

0.53

0.58

0.022

VvHY5-2

VIT_05s0020g01090

210

67

48

0.99

0.47

0.002

COP1 (AT2G32950, 675 aa)

VvCOP1-1

VIT_12s0059g01420

676

100

75

0.25

-0.26

-

VvCOP1-2

VIT_10s0523g00030

602

89

78

0.25

-0.07

-

RUP1 (AT5G52250, 385 aa)

VvRUP

VIT_16s0050g00020

770

94

60

1.49

1.36

0.004

RUP2 (AT5G23730, 368 aa)

VvRUP

VIT_16s0050g00020

770

98

64

1.49

1.36

0.004

  1. Arabidopsis protein name abbreviations are highlighted in bold.
  2. aLog2 of normalized expression ratio in the NimbleGen microarrays. bDifferential expression significance P <0.05 for UV factor in ANOVA.