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Table 1 Sequence assembly results from three B. edulis transcriptome databases

From: BeMADS1 is a key to delivery MADSs into nucleus in reproductive tissues-De novo characterization of Bambusa edulis transcriptome and study of MADS genes in bamboo floral development

  Platform Unigene Total length (nt) Min length (bp) Max length (bp) Mean length (bp) N50 GC percentage N percentage
454 454 15,117 7,824,977 200 4,347 518 562a 46.84% 0.01%
Illumina Illumina 54,830 19,681,401 200 4,666 359 361b 50.44% 0.23%
Hybrid 454+Illumina 8,241 5,517,588 200 4,666 670 730c 48.02% 0.13%
  1. a50% of the assembled bases were incorporated into contigs of 562 bp or longer.
  2. b50% of the assembled bases were incorporated into unigenes of 361 bp or longer.
  3. c50% of the assembled bases were incorporated into unigenes of 730 bp or longer.
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