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Table 2 Distribution of low-abundant sequences found uniquely under control conditions (380 ppm CO 2 ), under elevated CO 2 (700 ppm CO 2 ), under elevated CO 2 plus drought and drought (380 ppm CO 2 ), or found to be common in all four SuperSAGE libraries at one time

From: Ragweed (Ambrosia artemisiifolia) pollen allergenicity: SuperSAGE transcriptomic analysis upon elevated CO2 and drought stress

Library

Control (380 ppm)

CO2(700 ppm)

CO2+ drought

Drought (380 ppm)

All libraries

# low abundant unique tags

     

Original dataset

4,260 (99.00%)

40,685 (99.76%)

15,865 (99.69%)

8,480 (99.12%)

24,131 (94.55%)

tpm >0.8

1,366 (96.95%)

1,438 (93.68%)

1,013 (95.39%)

1,168 (93.97%)

16,036 (91.86%)

tpm >0.8; score >40; w/o “no hits”

429 (96.84%)

374 (88.84%)

254 (94.07%)

334 (94.89%)

3,207 (90.16%)

  1. Data were analyzed for different filter criteria.