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Table 1 Transposable elements in the cranberry genome

From: The American cranberry: first insights into the whole genome of a species adapted to bog habitat

  Cranberry Cucumber Apple Grape Arabidopsis Rice Melon Maize
  % of genome % of genome % of genome % of genome % of genome % of genome % of genome % of genome
Transposable Elements 39.53 14.80 42.40 21.50 18.50 39.60 24.10 84.20
Class I: retrotransposons 10.14 6.9 37.6 19.4 7.5 25.9 12.16 75.60
LTR/Copia 3.50 - 5.5 4.8 1.4 2.5 10.43 23.70
LTR/Gypsy 3.72 - 25.2 14.0 5.2 12.0 46.40
SINE 0.45 - - - - 0.5 0.01 -
LINE 2.20 - 6.5 0.6 0.9 0.8 1.74 1.00
Others 0.27 - 0.4 - - - - -
Unclassified - - - - - 10.1 11.64 4.50
Class II: DNA transposons 5.34 0.8 0.9 1.4 11.0 13.7 1.24 8.60
Hobo-Activator 2.51 - 0.3 0.8 0.3 0.5 - 1.1
Tc1-IS630-Pogo 0.10 - - - 0.1 - - -
Tourist/Harbinger 0.25 - - - 0.2 1.5 - 1.0
Others 2.48 - 0.6 0.6 9.9 7.4 - 6.5
Unclassified   - - - 0.5 4.3 - -
Unknown 24.04 7.1 3.9 0.7 - - - -
  1. The percent of the genome for each type are shown relative to other selected plant species.