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Table 2 Summary of SNP characteristics in the two RIL populations

From: Genetic architecture of rind penetrometer resistance in two maize recombinant inbred line populations

 

POP-HRC

POP-BYB

Mean ± SD

Range

Mean ± SD

Range

High-quality SNP number

2866

 

3029

 

SNP missing rate (%)

0.83 ± 1.44

0.00–15.35

0.90 ± 1.60

0.00–17.02

MAF of SNPs

0.21 ± 0.22

0.00–0.50

0.23 ± 0.22

0.00–0.50

SNP heterozygosity (%)

2.38 ± 2.86

0.00–13.49

0.92 ± 1.10

0.00–4.79

SNP missing rate in each line (%)

0.83 ± 0.53

0.07–3.49

0.90 ± 2.46

0.00–17.70

SNP heterozygosity in each line (%)

2.40 ± 1.48

0.10–7.68

0.92 ± 1.12

0.00–5.88