Table 5 Expression of candidate genes in the interval between the two Indel markers M3 and M5
Gene ID | cDNA/ homologous EST | Probe Set ID | Putative function | Fold-change | |
|---|---|---|---|---|---|
CJ06(+/-)a | TN1(+/-)b | ||||
LOC_Os06g09910 | AK064613 | Os.48661.1.S1_at | Phosphopantothenoylcysteine decarboxylase | -1.28 | -1.04 |
LOC_Os06g09920 | No | No | Expressed protein | ||
LOC_Os06g09930 | AK111880 | Os.39747.1.S1_at | G protein coupled receptor | -1.28 | -1.19 |
LOC_Os06g09940 | No | OsAffx.27540.1.S1_at | Expressed protein | 1.50 | 1.15 |
LOC_Os06g09950 | No | OsAffx.15341.1.S1_at | Expressed protein | 1.16 | 1.14 |
LOC_Os06g09960 | No | OsAffx.27541.1.S1_at | Expressed protein | 2.28 | 1.04 |
LOC_Os06g09970 | No | OsAffx.4783.1.S1_at | Expressed protein | -2.48 | 2.02 |
LOC_Os06g09980 | AK111302 | Os.54864.2.S1_at | Expressed protein | 1.49 | 1.39 |
LOC_Os06g09990 | No | OsAffx.27542.1.S1_s_at | Expressed protein | -1.07 | 1.00 |
LOC_Os06g10000 | AK108188 | Os.55490.1.S1_at | Expressed protein | -2.34 | 1.05 |
LOC_Os06g10010 | No | No | Expressed protein | ||
LOC_Os06g10020 | AK109163 | Os.56042.1.S1_at | Expressed protein | 1.02 | 1.22 |
LOC_Os06g10030 | No | No | Expressed protein | ||
LOC_Os06g10040 | No | OsAffx.27544.1.A1_at | Expressed protein | 1.28 | 1.06 |
LOC_Os06g10050 | No | No | Expressed protein | ||
LOC_Os06g10060 | No | OsAffx.23916.1.S1_at | Expressed protein | 1.37 | 1.06 |
LOC_Os06g10070 | No | OsAffx.4784.1.S1_at | Expressed protein | 1.30 | 1.03 |
LOC_Os06g10090 | No | No | Expressed protein | ||
LOC_Os06g10100 | AK106373 | Os.54648.1.S1_at | Expressed protein | -1.14 | 1.17 |
LOC_Os06g10109 | AK063905 | Os.20998.1.S1_at | Expressed protein | -2.33 | 1.40 |