Skip to main content

Table 1 Sequencing and assembly statistics for Miscanthus sinensis and M. sacchariflorus ESTs

From: Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships

 

M. sinensis

M. sacchariflorus

 

Leaf

Rhizome

Leaf

Rhizome

Read No.

457,891

512,950

288,806

267,952

Total read length (bp)

140,496,482

155,223,677

96,218,568

89,406,409

Average read length (bp)

307

303

333

333

Contig No

12,166

13,170

8,732

8,104

Contig length (bp)

11,802,712

12,154,482

8,670,971

7,832,874

Average length of contig (bp)

970

923

993

967

Contig range (bp)

84-5,164

100-6,590

125-6,402

123-6,230

> = 1 kb

4,280 (35.2%)

4,149 (31.5%)

3,079 (35.3%)

2,782 (34.3%)

> = 200 bp

12,144 (99.8%)

13,146 (99.8%)

8,721 (99.9%)

8,095 (99.9%)

Singleton No.

89,648

112,138

66,881

63,212

Singleton length (bp)

25,195,941

31,614,461

20,040,968

19,174,280