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Table 2 Consensus QTLs for seed weight and silique length obtained by meta-analysis

From: A combined linkage and regional association mapping validation and fine mapping of two major pleiotropic QTLs for seed weight and silique length in rapeseed (Brassica napus L.)

Consensus QTL Linkage group LOD R2 (%) Peak position Confidence interval (2-LOD) Additive effecta Experiments code (m, b, w) b
cqSW.A01-1 A01 4.8-5.5 1.7-1.8 32.3 31.2-33.5 - W11F2:3(m,w)
cqSW.A01-2 A01 2.7-3.5 6.2-6.7 43.9 41.6-46.2 - W10F2:3(b)|W11F2:3(b,w)
cqSW.A01-3 A01 3.7-3.7 0.8-1.7 145.3 144.0-146.6 + W11F2:3(m,b)
cqSW.A03-1 A03 6.2 15.1 54.2 54.0-55.5 0.42 W09F2(m)
cqSW.A03-2 A03 2.6-3.0 9.1-11.1 79.8 78.7-80.9 + W10F2:3(b,w)
cqSW.A04 A04 3.8-4.0 0.7-2.5 76 75.5-76.5 + W11F2:3(m,w)
cqSW.A07 A07 2.6-3.6 4.0-11.7 76.2 72.9-79.6 ± W10F2:3(b)|W11F2:3(m,b,w)
cqSW.A08 A08 2.7-5.1 1.1-13.9 22 20.5-23.4 ± W09F2(m)|W10F2:3(b,w)|W11F2:3(b,w)
cqSW.A09-1 A09 2.7-10.0 9.1-67.1 42 40.9-43.1 - W09F2(m)|W10F2:3(m,b,w)|W11F2:3(m,b,w)|X11F2:3(m)|X11F2:4(m,b,w)
cqSW.A09-2 A09 9.3 13.4 86.3 84.3-88.2 0.34 W10F2:3(m)
cqSW.A09-3 A09 5.8-9.0 7.2-26.9 109.4 106.5-112.3 + W10F2:3(m,b,w)|W11F2:3(m,w)|X11F2:4(m,b,w)
cqSW.C02 C02 3.6-4.4 7.6-1.9 27.2 26.7-27.8 - W11F2:3(m,w)
cqSW.C06 C06 4.3 3.4 5 0-10.5 -0.19 X11F2:4(m)
cqSL.A04-1 A04 7.1 5.9 27.8 26.8-28.0 -8.61 X11F2:3
cqSL.A04-2 A04 7.2 20.1 37.5 35.6-39.5 -4.77 X11F2:3
cqSL.A06 A06 6.2 9 23 17.3-25.6 6.19 X11F2:4
cqSL.A09-1 A09 4.5-7.8 7.8-544 45.1 44.0-46.2 ± W09F2|W10F2:3|W11F2:3|X11F2:3|X11F2:4
cqSL.A09-2 A09 10.0-15.4 9.9-16.6 109 102.5-115.6 + W09F2|W10F2:3
cqSL.C01 C01 2.6-6.6 2.1-9.7 40.2 36.9-43.5 - W09F2|W10F2:3|W11F2:3
cqSL.C02-1 C02 4.4 7.7 27.2 25.9-28.7 -9.8 W10F2:3
cqSL.C02-2 C02 4.1 5.1 35.9 31.6-42.2 -3.37 W11F2:3
cqSL.C02-3 C02 5.4 6.3 81.5 80.7-88.0 -4.58 X11F2:3
  1. a: “+”, “-” and “±” indicate the direction of the additive effect.
  2. b: m, b and w represent the main raceme, raceme branch and whole-plant thousand seed weight, respectively.