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Table 3 Distribution of SSRs with respect to putative open reading frames (ORFs)

From: Identification of stress-responsive genes in Ammopiptanthus mongolicususing ESTs generated from cold- and drought-stressed seedlings

Repeat motif

Within ORF

5′UTR

3′UTR

3′mix

ORF undefined

All

Dinucleotide

0

29

5

0

2

36

Trinucleotide

41

20

7

2

6

76

Tetranucelotide

0

8

9

0

2

19

Pentanucleotide

0

7

1

0

1

9

Hexanucleotide

7

7

1

0

0

15

Total

48

71

23

2

11

155

  1. UTR, untranslated regions; 3′mix, SSRs extend over stop codon of coding region and UTR.