Skip to main content

Table 1 TaSKs /TaSKs sequence identities at the genomic, CDS and protein level

From: Identification and characterization of two wheat Glycogen Synthase Kinase 3/ SHAGGY-like kinases

A

Genomic

TaSK1-A

TaSK1-B

TaSK1-C

TaSK2-A

TaSK2-B

TaSK2-C

TaSK1-A

 

96.0

88.8

54.2

51.9

54.4

TaSK1-B

  

88.5

53.8

51.6

54.1

TaSK-1C

   

53.1

51.0

53.3

TaSK2-A

    

90.3

97.9

TaSK2-B

     

90.7

TaSK2-C

      

B

CDS

TaSK1-A

TaSK1-B

TaSK1-C

TaSK2-A

TaSK2-B

TaSK2-C

TaSK1-A

 

98.4

97.2

82.7

82.7

82.7

TaSK1-B

  

96.9

82.5

82.5

82.5

TaSK1-C

   

83.0

83.0

83.0

TaSK2-A

    

98.9

99.7

TaSK2-B

     

98.9

TaSK2-C

      

C

protein

TaSK1-A

TaSK1-B

TaSK1-C

TaSK2-A

TaSK2-B

TaSK2-C

TaSK1-A

 

99

99

88.3

88.6

88.6

TaSK1-B

  

98.8

88.3

88.6

88.6

TaSK1-C

   

88.6

88.8

88.8

TaSK2-A

    

99.3

99.3

TaSK2-B

     

99.5

TaSK2-C

      
  1. Indicated values represent the percentage of identity among the consensus sequences of TaSKs / TaSKs at the genomic level (A), CDS level (B) and predicted protein level (C). Identities were calculated using a Percent Identity Matrix created by Clustal 2.0.12. Sequence of TaSK1-C intron 1 is still unknown. Therefore genomic TaSK1-C identities were calculated by considering unknown intron 1 as being a gap.
Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us