Table 2 Characteristics of NB-containing RGH sequence clusters in the Gy14 genome
Cluster Chr # | Location a | Gy14 scaffolds | # RGHs in cluster | Physical span of cluster (kb) | RGH Density (#RGHs/100Â kb) | Genetic span of cluster (cM) | Syntenic cluster in melon b |
|---|---|---|---|---|---|---|---|
1 | Chr2 | scaffold01037 | 2 | 857.3 | 0.2 | 1.4 | No |
2 | Chr2 | scaffold00894 | 11 | 288.8 | 3.8 | 1.8 | Yes (10) |
3 | Chr2 | scaffold01227 | 3 | 413.4 | 0.7 | 2.0 | Yes (2) |
4 | Chr2 | scaffold00245 | 4 | 109.5 | 3.6 | 2.5 | No |
5 | Chr3 | scaffold02229 | 2 | 59.6 | 3.4 | 0.0 | No |
6 | Chr3 | scaffold03356 | 7 | 1143.1 | 0.6 | 5.9 | Yes (3) |
7 | Chr4 | scaffold00919 | 5 | 43.4 | 11.5 | 0.6 | Yes (4) |
8 | Chr5 | scaffold02023 | 12 | 258.3 | 4.6 | 0.5 | Yes (7) |
9 | Chr7 | scaffold01024 | 6 | 94.4 | 6.4 | 0.0 | Yes (6) |