Motifs predicted by Promzea compared to experimentally defined motifs in the literature. Shown are the motif binding sites for transcription factor P (and C1, see text) in the phlobaphene and anthocyanin biosynthetic pathways. The preferential position of each motif predicted by Promzea is indicated in the fourth column from the right. The e-value for STAMP is indicated by the False Discovery Ratio (FDR). The superscript number in the extreme right column represents the number of motif copies present in the promoter of the indicated gene (−200 bp to +1).