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Table 6 Sequence identities between intact contigs in Geraniaceae and Arabidopsis thaliana sigma factors

From: Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing

Arabidopsis thaliana

Geranium maderense

Pelargoniumx hortorum

Sequence identity (%)a

Nucleotide

Amino acid

Nucleotide

Amino acid

Sig 1

64.5

52.4

61.1

50.4

Sig 2

62.6

48.9

62.5

47.1

Sig 3

57.7

39.9

58.6

43.3

Sig 4

58.6

42.6

58.3

43.5

Sig 5

64.3

54.1

65.8

55.0

Sig 6

58.6

41.1

59.6

42.4

  1. aIn cases where there is more than one intact contig for a sigma factor, the one with highest sequence identity to Arabidopsis was selected for comparison.