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Table 6 Sequence identities between intact contigs in Geraniaceae and Arabidopsis thaliana sigma factors

From: Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing

Arabidopsis thaliana Geranium maderense Pelargoniumx hortorum
Sequence identity (%)a Nucleotide Amino acid Nucleotide Amino acid
Sig 1 64.5 52.4 61.1 50.4
Sig 2 62.6 48.9 62.5 47.1
Sig 3 57.7 39.9 58.6 43.3
Sig 4 58.6 42.6 58.3 43.5
Sig 5 64.3 54.1 65.8 55.0
Sig 6 58.6 41.1 59.6 42.4
  1. aIn cases where there is more than one intact contig for a sigma factor, the one with highest sequence identity to Arabidopsis was selected for comparison.