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Table 3 Potential candidate genes for artemisinin biosynthesis

From: Differential transcriptome analysis of glandular and filamentous trichomes in Artemisia annua

Annotation Contig Sum normalized counts of filamentous trichomes Sum normalized counts of glandular trichomes Log2fold change Adjusted p-value
Cytochromes      
CYP81 comp69_c0_seq1_1 1302 77238 5.9E + 00 8.2E-05
CYP82 comp548_c0_seq1_1 106 4142 5.2E + 00 3.5E-03
  comp548_c0_seq2_1 128 3547 4.8E + 00 5.0E-02
  sum 234 7689   
CYP76B1 comp15043_c0_seq2_1 0 233 3.2E + 01 4.6E-02
CYP450 comp3673_c0_seq1_1 18 1368 6.4E + 00 2.4E-02
cytochrome c-type comp586_c0_seq1_1 28 3002 6.4E + 00 1.3E-03
  comp586_c0_seq3_1 26 4256 7.4E + 00 3.5E-05
  comp586_c0_seq4_1 0 106 3.1E + 01 2.5E-02
  sum 54 7364   
Peroxidases      
Peroxidase comp252_c0_seq1_1 95 4240 5.5E + 00 9.1E-03
  comp252_c0_seq3_1 22 994 5.5E + 00 1.3E-02
  comp252_c0_seq4_1 83 6515 6.3E + 00 4.5E-03
  comp252_c0_seq5_1 9 877 6.8E + 00 1.4E-02
  sum 208 12625   
Peroxidase 49 comp2084_c0_seq1_1 145 2649 4.3E + 00 3.0E-02
Gluthatione peroxidase comp6217_c0_seq4_1 0 75 3.0E + 01 4.5E-02
Dioxygenases      
Flavanone 3-hydroxylase comp225_c0_seq1_1 1507 20326 3.8E + 00 1.0E-02
Flavanone 3-hydroxylase comp453_c0_seq1_1 706 16165 4.5E + 00 1.3E-02
  1. Potential candidate cytochromes, peroxidases and dioxygenases with a significantly higher expression level in glandular trichomes. The normalized counts of 6 samples with filamentous trichomes are summed and compared with 6 glandular trichome samples. Log2-fold changes are given as well as adjusted p-values.