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Table 2 Names and the molecular characterization of vernalization response alleles currently reported in polyploid wheat

From: Molecular characterization of vernalization and response genes in bread wheat from the Yellow and Huai Valley of China

Locus

Allele

NCBI No.

Molecular characterization

Reference

Vrn-A1

vrn-A1

AY747600

-

[20]

 

Vrn-A1a

AY616458, AY616459

231-bp and 140-bp insertions at -439 bp and -348 bp, respectively.

[9]

 

Vrn-A1b

AY616461

20-bp deletion at -157 bp

[9]

 

Vrn-A1c

AY747599

5504-bp deletion at +1349 bp

[20]

 

Vrn-A1d

AY616462

32-bp deletion at -214 bp

[9]

 

Vrn-A1e

AY616463

54-bp deletion at -220 bp

[9]

Vrn-B1

vrn-B1

AY747604

-

[20]

 

Vrn-B1a

AY747603

6850-bp deletion at +836 bp

[20]

 

Vrn-B1b

FJ766015

6850-bp deletion at +836 bp and 37-bp deletion at +7992 bp

[22]

 

Vrn-B1c

HQ593668, HQ130482

817-bp deletion and 0.4-kb duplication at +798 bp

[32]

[25]

Vrn-B3

vrn-B3

DQ890162

-

[10]

 

Vrn-B3a

DQ890165

5300-bp insertion at -592 bp

[10]

 

Vrn-B3b

JN627519

890-bp insertion at -429 bp

In this paper

 

Vrn-B3c

JQ082311

5300-bp insertion at -592 bp but 20-bp and 4-bp deletions at -3543 bp and -3591 bp

In this paper

Vrn-D1

vrn-D1

AY747606

-

[20]

 

Vrn-D1a

AY747597

4235-bp deletion at +810 bp

[20]